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New Structural and Single Nucleotide Mutations in Type I and Type II Collagens in Taiwanese Children With Type I and Type II Collagenopathies

Collagenopathy is a rare genetic condition characterized by abnormality in either collagen structure or metabolism. Variations in its clinical presentations highlight diversity in the genetic causes and potential existence of concurrent mutations. Through whole exome sequencing (WES) complemented wi...

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Autores principales: Tsai, Meng-Che, Chou, Yen-Yin, Li, Chia-Yi, Wang, Yi-Chieh, Yu, Hui-Wen, Chen, Chia-Hsiang, Chen, Peng-Chieh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8355745/
https://www.ncbi.nlm.nih.gov/pubmed/34394176
http://dx.doi.org/10.3389/fgene.2021.594285
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author Tsai, Meng-Che
Chou, Yen-Yin
Li, Chia-Yi
Wang, Yi-Chieh
Yu, Hui-Wen
Chen, Chia-Hsiang
Chen, Peng-Chieh
author_facet Tsai, Meng-Che
Chou, Yen-Yin
Li, Chia-Yi
Wang, Yi-Chieh
Yu, Hui-Wen
Chen, Chia-Hsiang
Chen, Peng-Chieh
author_sort Tsai, Meng-Che
collection PubMed
description Collagenopathy is a rare genetic condition characterized by abnormality in either collagen structure or metabolism. Variations in its clinical presentations highlight diversity in the genetic causes and potential existence of concurrent mutations. Through whole exome sequencing (WES) complemented with multiplex ligation-dependent probe amplification, we identified the genetic etiologies for six cases with osteogenesis imperfecta (OI) in COL1A1 (p.T1298N, p.Q1280Pfs(∗)51, and p.G557Vfs(∗)23) and COL1A2 (c.1-1677_133-441del) as well as three cases with spondyloepiphyseal dysplasia congenita in COL2A1 (p.G1041S, p.G654S, and p.G441A). Co-occurrence of COL1A1 and WNT1 mutations was found in a patient with a mild OI phenotype but severe osteoporosis. These findings extended the pathogenic variant spectrum of COL1A1, COL1A2, and COL2A1 for type I and type II collagenopathies. Although WES provides a fast and accurate method to identify the genetic causes in most of the patients with type I and type II collagenopathies, its limitation of detecting CNVs because of variable capturing uniformity should be kept in mind when interpreting the results. Taken together, we demonstrate that multiple genetic characterizing technologies can provide an accurate and efficient molecular diagnostic of new genetic variants in disease-causing genes that are compatible with clinical phenotypes.
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spelling pubmed-83557452021-08-12 New Structural and Single Nucleotide Mutations in Type I and Type II Collagens in Taiwanese Children With Type I and Type II Collagenopathies Tsai, Meng-Che Chou, Yen-Yin Li, Chia-Yi Wang, Yi-Chieh Yu, Hui-Wen Chen, Chia-Hsiang Chen, Peng-Chieh Front Genet Genetics Collagenopathy is a rare genetic condition characterized by abnormality in either collagen structure or metabolism. Variations in its clinical presentations highlight diversity in the genetic causes and potential existence of concurrent mutations. Through whole exome sequencing (WES) complemented with multiplex ligation-dependent probe amplification, we identified the genetic etiologies for six cases with osteogenesis imperfecta (OI) in COL1A1 (p.T1298N, p.Q1280Pfs(∗)51, and p.G557Vfs(∗)23) and COL1A2 (c.1-1677_133-441del) as well as three cases with spondyloepiphyseal dysplasia congenita in COL2A1 (p.G1041S, p.G654S, and p.G441A). Co-occurrence of COL1A1 and WNT1 mutations was found in a patient with a mild OI phenotype but severe osteoporosis. These findings extended the pathogenic variant spectrum of COL1A1, COL1A2, and COL2A1 for type I and type II collagenopathies. Although WES provides a fast and accurate method to identify the genetic causes in most of the patients with type I and type II collagenopathies, its limitation of detecting CNVs because of variable capturing uniformity should be kept in mind when interpreting the results. Taken together, we demonstrate that multiple genetic characterizing technologies can provide an accurate and efficient molecular diagnostic of new genetic variants in disease-causing genes that are compatible with clinical phenotypes. Frontiers Media S.A. 2021-07-28 /pmc/articles/PMC8355745/ /pubmed/34394176 http://dx.doi.org/10.3389/fgene.2021.594285 Text en Copyright © 2021 Tsai, Chou, Li, Wang, Yu, Chen and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Tsai, Meng-Che
Chou, Yen-Yin
Li, Chia-Yi
Wang, Yi-Chieh
Yu, Hui-Wen
Chen, Chia-Hsiang
Chen, Peng-Chieh
New Structural and Single Nucleotide Mutations in Type I and Type II Collagens in Taiwanese Children With Type I and Type II Collagenopathies
title New Structural and Single Nucleotide Mutations in Type I and Type II Collagens in Taiwanese Children With Type I and Type II Collagenopathies
title_full New Structural and Single Nucleotide Mutations in Type I and Type II Collagens in Taiwanese Children With Type I and Type II Collagenopathies
title_fullStr New Structural and Single Nucleotide Mutations in Type I and Type II Collagens in Taiwanese Children With Type I and Type II Collagenopathies
title_full_unstemmed New Structural and Single Nucleotide Mutations in Type I and Type II Collagens in Taiwanese Children With Type I and Type II Collagenopathies
title_short New Structural and Single Nucleotide Mutations in Type I and Type II Collagens in Taiwanese Children With Type I and Type II Collagenopathies
title_sort new structural and single nucleotide mutations in type i and type ii collagens in taiwanese children with type i and type ii collagenopathies
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8355745/
https://www.ncbi.nlm.nih.gov/pubmed/34394176
http://dx.doi.org/10.3389/fgene.2021.594285
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