Cargando…

A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies

Background: The limited diagnostic accuracy of biomarkers in children at risk of a serious bacterial infection (SBI) might be due to the imperfect reference standard of SBI. We aimed to evaluate the diagnostic performance of a new classification algorithm for biomarker discovery in children at risk...

Descripción completa

Detalles Bibliográficos
Autores principales: Nijman, Ruud G., Oostenbrink, Rianne, Moll, Henriette A., Casals-Pascual, Climent, von Both, Ulrich, Cunnington, Aubrey, De, Tisham, Eleftheriou, Irini, Emonts, Marieke, Fink, Colin, van der Flier, Michiel, de Groot, Ronald, Kaforou, Myrsini, Kohlmaier, Benno, Kuijpers, Taco W., Lim, Emma, Maconochie, Ian K., Paulus, Stephane, Martinon-Torres, Federico, Pokorn, Marko, Romaine, Sam T., Calle, Irene Rivero, Schlapbach, Luregn J., Smit, Frank J., Tsolia, Maria, Usuf, Effua, Wright, Victoria J., Yeung, Shunmay, Zavadska, Dace, Zenz, Werner, Levin, Michael, Herberg, Jethro A., Carrol, Enitan D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8356564/
https://www.ncbi.nlm.nih.gov/pubmed/34395340
http://dx.doi.org/10.3389/fped.2021.688272
_version_ 1783736969140895744
author Nijman, Ruud G.
Oostenbrink, Rianne
Moll, Henriette A.
Casals-Pascual, Climent
von Both, Ulrich
Cunnington, Aubrey
De, Tisham
Eleftheriou, Irini
Emonts, Marieke
Fink, Colin
van der Flier, Michiel
de Groot, Ronald
Kaforou, Myrsini
Kohlmaier, Benno
Kuijpers, Taco W.
Lim, Emma
Maconochie, Ian K.
Paulus, Stephane
Martinon-Torres, Federico
Pokorn, Marko
Romaine, Sam T.
Calle, Irene Rivero
Schlapbach, Luregn J.
Smit, Frank J.
Tsolia, Maria
Usuf, Effua
Wright, Victoria J.
Yeung, Shunmay
Zavadska, Dace
Zenz, Werner
Levin, Michael
Herberg, Jethro A.
Carrol, Enitan D.
author_facet Nijman, Ruud G.
Oostenbrink, Rianne
Moll, Henriette A.
Casals-Pascual, Climent
von Both, Ulrich
Cunnington, Aubrey
De, Tisham
Eleftheriou, Irini
Emonts, Marieke
Fink, Colin
van der Flier, Michiel
de Groot, Ronald
Kaforou, Myrsini
Kohlmaier, Benno
Kuijpers, Taco W.
Lim, Emma
Maconochie, Ian K.
Paulus, Stephane
Martinon-Torres, Federico
Pokorn, Marko
Romaine, Sam T.
Calle, Irene Rivero
Schlapbach, Luregn J.
Smit, Frank J.
Tsolia, Maria
Usuf, Effua
Wright, Victoria J.
Yeung, Shunmay
Zavadska, Dace
Zenz, Werner
Levin, Michael
Herberg, Jethro A.
Carrol, Enitan D.
author_sort Nijman, Ruud G.
collection PubMed
description Background: The limited diagnostic accuracy of biomarkers in children at risk of a serious bacterial infection (SBI) might be due to the imperfect reference standard of SBI. We aimed to evaluate the diagnostic performance of a new classification algorithm for biomarker discovery in children at risk of SBI. Methods: We used data from five previously published, prospective observational biomarker discovery studies, which included patients aged 0– <16 years: the Alder Hey emergency department (n = 1,120), Alder Hey pediatric intensive care unit (n = 355), Erasmus emergency department (n = 1,993), Maasstad emergency department (n = 714) and St. Mary's hospital (n = 200) cohorts. Biomarkers including procalcitonin (PCT) (4 cohorts), neutrophil gelatinase-associated lipocalin-2 (NGAL) (3 cohorts) and resistin (2 cohorts) were compared for their ability to classify patients according to current standards (dichotomous classification of SBI vs. non-SBI), vs. a proposed PERFORM classification algorithm that assign patients to one of eleven categories. These categories were based on clinical phenotype, test outcomes and C-reactive protein level and accounted for the uncertainty of final diagnosis in many febrile children. The success of the biomarkers was measured by the Area under the receiver operating Curves (AUCs) when they were used individually or in combination. Results: Using the new PERFORM classification system, patients with clinically confident bacterial diagnosis (“definite bacterial” category) had significantly higher levels of PCT, NGAL and resistin compared with those with a clinically confident viral diagnosis (“definite viral” category). Patients with diagnostic uncertainty had biomarker concentrations that varied across the spectrum. AUCs were higher for classification of “definite bacterial” vs. “definite viral” following the PERFORM algorithm than using the “SBI” vs. “non-SBI” classification; summary AUC for PCT was 0.77 (95% CI 0.72–0.82) vs. 0.70 (95% CI 0.65–0.75); for NGAL this was 0.80 (95% CI 0.69–0.91) vs. 0.70 (95% CI 0.58–0.81); for resistin this was 0.68 (95% CI 0.61–0.75) vs. 0.64 (0.58–0.69) The three biomarkers combined had summary AUC of 0.83 (0.77–0.89) for “definite bacterial” vs. “definite viral” infections and 0.71 (0.67–0.74) for “SBI” vs. “non-SBI.” Conclusion: Biomarkers of bacterial infection were strongly associated with the diagnostic categories using the PERFORM classification system in five independent cohorts. Our proposed algorithm provides a novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies.
format Online
Article
Text
id pubmed-8356564
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-83565642021-08-12 A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies Nijman, Ruud G. Oostenbrink, Rianne Moll, Henriette A. Casals-Pascual, Climent von Both, Ulrich Cunnington, Aubrey De, Tisham Eleftheriou, Irini Emonts, Marieke Fink, Colin van der Flier, Michiel de Groot, Ronald Kaforou, Myrsini Kohlmaier, Benno Kuijpers, Taco W. Lim, Emma Maconochie, Ian K. Paulus, Stephane Martinon-Torres, Federico Pokorn, Marko Romaine, Sam T. Calle, Irene Rivero Schlapbach, Luregn J. Smit, Frank J. Tsolia, Maria Usuf, Effua Wright, Victoria J. Yeung, Shunmay Zavadska, Dace Zenz, Werner Levin, Michael Herberg, Jethro A. Carrol, Enitan D. Front Pediatr Pediatrics Background: The limited diagnostic accuracy of biomarkers in children at risk of a serious bacterial infection (SBI) might be due to the imperfect reference standard of SBI. We aimed to evaluate the diagnostic performance of a new classification algorithm for biomarker discovery in children at risk of SBI. Methods: We used data from five previously published, prospective observational biomarker discovery studies, which included patients aged 0– <16 years: the Alder Hey emergency department (n = 1,120), Alder Hey pediatric intensive care unit (n = 355), Erasmus emergency department (n = 1,993), Maasstad emergency department (n = 714) and St. Mary's hospital (n = 200) cohorts. Biomarkers including procalcitonin (PCT) (4 cohorts), neutrophil gelatinase-associated lipocalin-2 (NGAL) (3 cohorts) and resistin (2 cohorts) were compared for their ability to classify patients according to current standards (dichotomous classification of SBI vs. non-SBI), vs. a proposed PERFORM classification algorithm that assign patients to one of eleven categories. These categories were based on clinical phenotype, test outcomes and C-reactive protein level and accounted for the uncertainty of final diagnosis in many febrile children. The success of the biomarkers was measured by the Area under the receiver operating Curves (AUCs) when they were used individually or in combination. Results: Using the new PERFORM classification system, patients with clinically confident bacterial diagnosis (“definite bacterial” category) had significantly higher levels of PCT, NGAL and resistin compared with those with a clinically confident viral diagnosis (“definite viral” category). Patients with diagnostic uncertainty had biomarker concentrations that varied across the spectrum. AUCs were higher for classification of “definite bacterial” vs. “definite viral” following the PERFORM algorithm than using the “SBI” vs. “non-SBI” classification; summary AUC for PCT was 0.77 (95% CI 0.72–0.82) vs. 0.70 (95% CI 0.65–0.75); for NGAL this was 0.80 (95% CI 0.69–0.91) vs. 0.70 (95% CI 0.58–0.81); for resistin this was 0.68 (95% CI 0.61–0.75) vs. 0.64 (0.58–0.69) The three biomarkers combined had summary AUC of 0.83 (0.77–0.89) for “definite bacterial” vs. “definite viral” infections and 0.71 (0.67–0.74) for “SBI” vs. “non-SBI.” Conclusion: Biomarkers of bacterial infection were strongly associated with the diagnostic categories using the PERFORM classification system in five independent cohorts. Our proposed algorithm provides a novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies. Frontiers Media S.A. 2021-07-28 /pmc/articles/PMC8356564/ /pubmed/34395340 http://dx.doi.org/10.3389/fped.2021.688272 Text en Copyright © 2021 Nijman, Oostenbrink, Moll, Casals-Pascual, von Both, Cunnington, De, Eleftheriou, Emonts, Fink, van der Flier, de Groot, Kaforou, Kohlmaier, Kuijpers, Lim, Maconochie, Paulus, Martinon-Torres, Pokorn, Romaine, Calle, Schlapbach, Smit, Tsolia, Usuf, Wright, Yeung, Zavadska, Zenz, Levin, Herberg, Carrol and the PERFORM consortium (Personalized Risk assessment in febrile children to optimize Real-life Management across the European Union). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pediatrics
Nijman, Ruud G.
Oostenbrink, Rianne
Moll, Henriette A.
Casals-Pascual, Climent
von Both, Ulrich
Cunnington, Aubrey
De, Tisham
Eleftheriou, Irini
Emonts, Marieke
Fink, Colin
van der Flier, Michiel
de Groot, Ronald
Kaforou, Myrsini
Kohlmaier, Benno
Kuijpers, Taco W.
Lim, Emma
Maconochie, Ian K.
Paulus, Stephane
Martinon-Torres, Federico
Pokorn, Marko
Romaine, Sam T.
Calle, Irene Rivero
Schlapbach, Luregn J.
Smit, Frank J.
Tsolia, Maria
Usuf, Effua
Wright, Victoria J.
Yeung, Shunmay
Zavadska, Dace
Zenz, Werner
Levin, Michael
Herberg, Jethro A.
Carrol, Enitan D.
A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies
title A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies
title_full A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies
title_fullStr A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies
title_full_unstemmed A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies
title_short A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies
title_sort novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies
topic Pediatrics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8356564/
https://www.ncbi.nlm.nih.gov/pubmed/34395340
http://dx.doi.org/10.3389/fped.2021.688272
work_keys_str_mv AT nijmanruudg anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT oostenbrinkrianne anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT mollhenriettea anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT casalspascualcliment anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT vonbothulrich anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT cunningtonaubrey anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT detisham anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT eleftheriouirini anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT emontsmarieke anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT finkcolin anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT vanderfliermichiel anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT degrootronald anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT kaforoumyrsini anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT kohlmaierbenno anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT kuijperstacow anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT limemma anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT maconochieiank anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT paulusstephane anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT martinontorresfederico anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT pokornmarko anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT romainesamt anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT calleirenerivero anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT schlapbachluregnj anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT smitfrankj anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT tsoliamaria anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT usufeffua anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT wrightvictoriaj anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT yeungshunmay anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT zavadskadace anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT zenzwerner anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT levinmichael anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT herbergjethroa anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT carrolenitand anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT anovelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT nijmanruudg novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT oostenbrinkrianne novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT mollhenriettea novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT casalspascualcliment novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT vonbothulrich novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT cunningtonaubrey novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT detisham novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT eleftheriouirini novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT emontsmarieke novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT finkcolin novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT vanderfliermichiel novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT degrootronald novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT kaforoumyrsini novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT kohlmaierbenno novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT kuijperstacow novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT limemma novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT maconochieiank novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT paulusstephane novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT martinontorresfederico novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT pokornmarko novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT romainesamt novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT calleirenerivero novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT schlapbachluregnj novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT smitfrankj novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT tsoliamaria novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT usufeffua novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT wrightvictoriaj novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT yeungshunmay novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT zavadskadace novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT zenzwerner novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT levinmichael novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT herbergjethroa novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT carrolenitand novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies
AT novelframeworkforphenotypingchildrenwithsuspectedorconfirmedinfectionforfuturebiomarkerstudies