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Advantages of an Automated Method Compared With Manual Methods for the Quantification of Intraepidermal Nerve Fiber in Skin Biopsy

Intraepidermal nerve fiber density (IENFD) measurements in skin biopsy are performed manually by 1–3 operators. To improve diagnostic accuracy and applicability in clinical practice, we developed an automated method for fast IENFD determination with low operator-dependency. Sixty skin biopsy specime...

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Autores principales: Corrà, Marta Francisca, Sousa, Mafalda, Reis, Inês, Tanganelli, Fabiana, Vila-Chã, Nuno, Sousa, Ana Paula, Magalhães, Rui, Sampaio, Paula, Taipa, Ricardo, Maia, Luís
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8357338/
https://www.ncbi.nlm.nih.gov/pubmed/34041546
http://dx.doi.org/10.1093/jnen/nlab045
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author Corrà, Marta Francisca
Sousa, Mafalda
Reis, Inês
Tanganelli, Fabiana
Vila-Chã, Nuno
Sousa, Ana Paula
Magalhães, Rui
Sampaio, Paula
Taipa, Ricardo
Maia, Luís
author_facet Corrà, Marta Francisca
Sousa, Mafalda
Reis, Inês
Tanganelli, Fabiana
Vila-Chã, Nuno
Sousa, Ana Paula
Magalhães, Rui
Sampaio, Paula
Taipa, Ricardo
Maia, Luís
author_sort Corrà, Marta Francisca
collection PubMed
description Intraepidermal nerve fiber density (IENFD) measurements in skin biopsy are performed manually by 1–3 operators. To improve diagnostic accuracy and applicability in clinical practice, we developed an automated method for fast IENFD determination with low operator-dependency. Sixty skin biopsy specimens were stained with the axonal marker PGP9.5 and imaged using a widefield fluorescence microscope. IENFD was first determined manually by 3 independent observers. Subsequently, images were processed in their Z-max projection and the intradermal line was delineated automatically. IENFD was calculated automatically (fluorescent images automated counting [FIAC]) and compared with manual counting on the same fluorescence images (fluorescent images manual counting [FIMC]), and with classical manual counting (CMC) data. A FIMC showed lower variability among observers compared with CMC (interclass correlation [ICC] = 0.996 vs 0.950). FIMC and FIAC showed high reliability (ICC = 0.999). A moderate-to-high (ICC = 0.705) was observed between CMC and FIAC counting. The algorithm process took on average 15 seconds to perform FIAC counting, compared with 10 minutes for FIMC counting. This automated method rapidly and reliably detects small nerve fibers in skin biopsies with clear advantages over the classical manual technique.
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spelling pubmed-83573382021-08-12 Advantages of an Automated Method Compared With Manual Methods for the Quantification of Intraepidermal Nerve Fiber in Skin Biopsy Corrà, Marta Francisca Sousa, Mafalda Reis, Inês Tanganelli, Fabiana Vila-Chã, Nuno Sousa, Ana Paula Magalhães, Rui Sampaio, Paula Taipa, Ricardo Maia, Luís J Neuropathol Exp Neurol Original Articles Intraepidermal nerve fiber density (IENFD) measurements in skin biopsy are performed manually by 1–3 operators. To improve diagnostic accuracy and applicability in clinical practice, we developed an automated method for fast IENFD determination with low operator-dependency. Sixty skin biopsy specimens were stained with the axonal marker PGP9.5 and imaged using a widefield fluorescence microscope. IENFD was first determined manually by 3 independent observers. Subsequently, images were processed in their Z-max projection and the intradermal line was delineated automatically. IENFD was calculated automatically (fluorescent images automated counting [FIAC]) and compared with manual counting on the same fluorescence images (fluorescent images manual counting [FIMC]), and with classical manual counting (CMC) data. A FIMC showed lower variability among observers compared with CMC (interclass correlation [ICC] = 0.996 vs 0.950). FIMC and FIAC showed high reliability (ICC = 0.999). A moderate-to-high (ICC = 0.705) was observed between CMC and FIAC counting. The algorithm process took on average 15 seconds to perform FIAC counting, compared with 10 minutes for FIMC counting. This automated method rapidly and reliably detects small nerve fibers in skin biopsies with clear advantages over the classical manual technique. Oxford University Press 2021-05-26 /pmc/articles/PMC8357338/ /pubmed/34041546 http://dx.doi.org/10.1093/jnen/nlab045 Text en © 2021 American Association of Neuropathologists, Inc. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Corrà, Marta Francisca
Sousa, Mafalda
Reis, Inês
Tanganelli, Fabiana
Vila-Chã, Nuno
Sousa, Ana Paula
Magalhães, Rui
Sampaio, Paula
Taipa, Ricardo
Maia, Luís
Advantages of an Automated Method Compared With Manual Methods for the Quantification of Intraepidermal Nerve Fiber in Skin Biopsy
title Advantages of an Automated Method Compared With Manual Methods for the Quantification of Intraepidermal Nerve Fiber in Skin Biopsy
title_full Advantages of an Automated Method Compared With Manual Methods for the Quantification of Intraepidermal Nerve Fiber in Skin Biopsy
title_fullStr Advantages of an Automated Method Compared With Manual Methods for the Quantification of Intraepidermal Nerve Fiber in Skin Biopsy
title_full_unstemmed Advantages of an Automated Method Compared With Manual Methods for the Quantification of Intraepidermal Nerve Fiber in Skin Biopsy
title_short Advantages of an Automated Method Compared With Manual Methods for the Quantification of Intraepidermal Nerve Fiber in Skin Biopsy
title_sort advantages of an automated method compared with manual methods for the quantification of intraepidermal nerve fiber in skin biopsy
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8357338/
https://www.ncbi.nlm.nih.gov/pubmed/34041546
http://dx.doi.org/10.1093/jnen/nlab045
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