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Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer

Radiomics is a method to mine large numbers of quantitative imaging features and develop predictive models. It has shown exciting promise for improved cancer decision support from early detection to personalized precision treatment, and therefore offers a desirable new direction for pancreatic cance...

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Autores principales: Wong, Jeffrey, Baine, Michael, Wisnoskie, Sarah, Bennion, Nathan, Zheng, Dechun, Yu, Lei, Dalal, Vipin, Hollingsworth, Michael A., Lin, Chi, Zheng, Dandan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8357939/
https://www.ncbi.nlm.nih.gov/pubmed/34381070
http://dx.doi.org/10.1038/s41598-021-95152-x
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author Wong, Jeffrey
Baine, Michael
Wisnoskie, Sarah
Bennion, Nathan
Zheng, Dechun
Yu, Lei
Dalal, Vipin
Hollingsworth, Michael A.
Lin, Chi
Zheng, Dandan
author_facet Wong, Jeffrey
Baine, Michael
Wisnoskie, Sarah
Bennion, Nathan
Zheng, Dechun
Yu, Lei
Dalal, Vipin
Hollingsworth, Michael A.
Lin, Chi
Zheng, Dandan
author_sort Wong, Jeffrey
collection PubMed
description Radiomics is a method to mine large numbers of quantitative imaging features and develop predictive models. It has shown exciting promise for improved cancer decision support from early detection to personalized precision treatment, and therefore offers a desirable new direction for pancreatic cancer where the mortality remains high despite the current care and intense research. For radiomics, interobserver segmentation variability and its effect on radiomic feature stability is a crucial consideration. While investigations have been reported for high-contrast cancer sites such as lung cancer, no studies to date have investigated it on CT-based radiomics for pancreatic cancer. With three radiation oncology observers and three radiology observers independently contouring on the contrast CT of 21 pancreatic cancer patients, we conducted the first interobserver segmentation variability study on CT-based radiomics for pancreatic cancer. Moreover, our novel investigation assessed whether there exists an interdisciplinary difference between the two disciplines. For each patient, a consensus tumor volume was generated using the simultaneous truth and performance level expectation algorithm, using the dice similarity coefficient (DSC) to assess each observer’s delineation against the consensus volume. Radiation oncology observers showed a higher average DSC of 0.81 ± 0.06 than the radiology observers at 0.69 ± 0.16 (p = 0.002). On a panel of 1277 radiomic features, the intraclass correlation coefficients (ICC) was calculated for all observers and those of each discipline. Large variations of ICCs were observed for different radiomic features, but ICCs were generally higher for the radiation oncology group than for the radiology group. Applying a threshold of ICC > 0.75 for considering a feature as stable, 448 features (35%) were found stable for the radiation oncology group and 214 features (16%) were stable from the radiology group. Among them, 205 features were found stable for both groups. Our results provide information for interobserver segmentation variability and its effect on CT-based radiomics for pancreatic cancer. An interesting interdisciplinary variability found in this study also introduces new considerations for the deployment of radiomics models.
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spelling pubmed-83579392021-08-13 Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer Wong, Jeffrey Baine, Michael Wisnoskie, Sarah Bennion, Nathan Zheng, Dechun Yu, Lei Dalal, Vipin Hollingsworth, Michael A. Lin, Chi Zheng, Dandan Sci Rep Article Radiomics is a method to mine large numbers of quantitative imaging features and develop predictive models. It has shown exciting promise for improved cancer decision support from early detection to personalized precision treatment, and therefore offers a desirable new direction for pancreatic cancer where the mortality remains high despite the current care and intense research. For radiomics, interobserver segmentation variability and its effect on radiomic feature stability is a crucial consideration. While investigations have been reported for high-contrast cancer sites such as lung cancer, no studies to date have investigated it on CT-based radiomics for pancreatic cancer. With three radiation oncology observers and three radiology observers independently contouring on the contrast CT of 21 pancreatic cancer patients, we conducted the first interobserver segmentation variability study on CT-based radiomics for pancreatic cancer. Moreover, our novel investigation assessed whether there exists an interdisciplinary difference between the two disciplines. For each patient, a consensus tumor volume was generated using the simultaneous truth and performance level expectation algorithm, using the dice similarity coefficient (DSC) to assess each observer’s delineation against the consensus volume. Radiation oncology observers showed a higher average DSC of 0.81 ± 0.06 than the radiology observers at 0.69 ± 0.16 (p = 0.002). On a panel of 1277 radiomic features, the intraclass correlation coefficients (ICC) was calculated for all observers and those of each discipline. Large variations of ICCs were observed for different radiomic features, but ICCs were generally higher for the radiation oncology group than for the radiology group. Applying a threshold of ICC > 0.75 for considering a feature as stable, 448 features (35%) were found stable for the radiation oncology group and 214 features (16%) were stable from the radiology group. Among them, 205 features were found stable for both groups. Our results provide information for interobserver segmentation variability and its effect on CT-based radiomics for pancreatic cancer. An interesting interdisciplinary variability found in this study also introduces new considerations for the deployment of radiomics models. Nature Publishing Group UK 2021-08-11 /pmc/articles/PMC8357939/ /pubmed/34381070 http://dx.doi.org/10.1038/s41598-021-95152-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Wong, Jeffrey
Baine, Michael
Wisnoskie, Sarah
Bennion, Nathan
Zheng, Dechun
Yu, Lei
Dalal, Vipin
Hollingsworth, Michael A.
Lin, Chi
Zheng, Dandan
Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_full Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_fullStr Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_full_unstemmed Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_short Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_sort effects of interobserver and interdisciplinary segmentation variabilities on ct-based radiomics for pancreatic cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8357939/
https://www.ncbi.nlm.nih.gov/pubmed/34381070
http://dx.doi.org/10.1038/s41598-021-95152-x
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