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Identification of Novel miRNAs in the F8 Gene Via Bioinformatics Tools

BACKGROUND: Hemophilia A is an X-linked bleeding disorder resulting in a deficiency of plasma clotting factor VIII and caused by mutations in the FVIII gene (F8 gene). MicroRNAs (miRNAs) in body fluids are promising biomarker candidates for Hemophilia A, due to their stability in body fluids and acc...

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Autores principales: Rezaei, Halimeh, Motovali-Bashi, Majid, Khalilian, Sheyda
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Institute of Genetic Engineering and Biotechnology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8358171/
https://www.ncbi.nlm.nih.gov/pubmed/34435059
http://dx.doi.org/10.30498/IJB.2021.2700
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author Rezaei, Halimeh
Motovali-Bashi, Majid
Khalilian, Sheyda
author_facet Rezaei, Halimeh
Motovali-Bashi, Majid
Khalilian, Sheyda
author_sort Rezaei, Halimeh
collection PubMed
description BACKGROUND: Hemophilia A is an X-linked bleeding disorder resulting in a deficiency of plasma clotting factor VIII and caused by mutations in the FVIII gene (F8 gene). MicroRNAs (miRNAs) in body fluids are promising biomarker candidates for Hemophilia A, due to their stability in body fluids and accessibility by non- or minimally-invasive procedures. Therefore; Advances in miRNA analysis methods resulted in a wide range of publications on miRNAs as putative biomarkers. OBJECTIVE: Here we tried to scan the F8 gene region to predict a novel miRNA and identify it as a regulator of the F8 gene. MATERIALS AND METHODS: To this aim, the ability to express novel miRNAs in F8 locus was assessed via reliable bioinformatics databases such as SSCprofiler, RNAfold, miREval, FOMmiR, MaturBayes, miRFIND, UCSC genome browser, Deep Sequencing, and miRBase. RESULTS: Data analysis from the relevant databases offers one stem-loop structure that is predicted to express a novel miRNA CONCLUSIONS: The diagnosis of Hemophilia A with the help of these types of biomarkers is a non-invasive procedure that has been demonstrated to have a significant role in the early diagnosis of the disease. Hopefully, the proposed candidate sequence will be confirmed in vitro and become a non-invasive biomarker in the near future
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spelling pubmed-83581712021-08-24 Identification of Novel miRNAs in the F8 Gene Via Bioinformatics Tools Rezaei, Halimeh Motovali-Bashi, Majid Khalilian, Sheyda Iran J Biotechnol Brief Report BACKGROUND: Hemophilia A is an X-linked bleeding disorder resulting in a deficiency of plasma clotting factor VIII and caused by mutations in the FVIII gene (F8 gene). MicroRNAs (miRNAs) in body fluids are promising biomarker candidates for Hemophilia A, due to their stability in body fluids and accessibility by non- or minimally-invasive procedures. Therefore; Advances in miRNA analysis methods resulted in a wide range of publications on miRNAs as putative biomarkers. OBJECTIVE: Here we tried to scan the F8 gene region to predict a novel miRNA and identify it as a regulator of the F8 gene. MATERIALS AND METHODS: To this aim, the ability to express novel miRNAs in F8 locus was assessed via reliable bioinformatics databases such as SSCprofiler, RNAfold, miREval, FOMmiR, MaturBayes, miRFIND, UCSC genome browser, Deep Sequencing, and miRBase. RESULTS: Data analysis from the relevant databases offers one stem-loop structure that is predicted to express a novel miRNA CONCLUSIONS: The diagnosis of Hemophilia A with the help of these types of biomarkers is a non-invasive procedure that has been demonstrated to have a significant role in the early diagnosis of the disease. Hopefully, the proposed candidate sequence will be confirmed in vitro and become a non-invasive biomarker in the near future National Institute of Genetic Engineering and Biotechnology 2021-04-01 /pmc/articles/PMC8358171/ /pubmed/34435059 http://dx.doi.org/10.30498/IJB.2021.2700 Text en Copyright: © 2021 The Author(s); Published by Iranian Journal of Biotechnology https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 Unported License, ( http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Report
Rezaei, Halimeh
Motovali-Bashi, Majid
Khalilian, Sheyda
Identification of Novel miRNAs in the F8 Gene Via Bioinformatics Tools
title Identification of Novel miRNAs in the F8 Gene Via Bioinformatics Tools
title_full Identification of Novel miRNAs in the F8 Gene Via Bioinformatics Tools
title_fullStr Identification of Novel miRNAs in the F8 Gene Via Bioinformatics Tools
title_full_unstemmed Identification of Novel miRNAs in the F8 Gene Via Bioinformatics Tools
title_short Identification of Novel miRNAs in the F8 Gene Via Bioinformatics Tools
title_sort identification of novel mirnas in the f8 gene via bioinformatics tools
topic Brief Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8358171/
https://www.ncbi.nlm.nih.gov/pubmed/34435059
http://dx.doi.org/10.30498/IJB.2021.2700
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