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Dynamics of SARS-CoV-2 in wastewater in three districts of the Buenos Aires metropolitan region, Argentina, throughout nine months of surveillance: A pilot study

In the current pandemic of COVID-19, sewage surveillance of SARS-CoV-2 genome has been used to complement viral epidemiology in different countries. The aim of this work was to introduce and evaluate this wastewater-based tool in the metropolitan region of Buenos Aires, Argentina. As a pilot study,...

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Autores principales: Barrios, Melina Elizabeth, Díaz, Sofía Micaela, Torres, Carolina, Costamagna, Damián Matías, Blanco Fernández, María Dolores, Mbayed, Viviana Andrea
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8359566/
https://www.ncbi.nlm.nih.gov/pubmed/34426365
http://dx.doi.org/10.1016/j.scitotenv.2021.149578
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author Barrios, Melina Elizabeth
Díaz, Sofía Micaela
Torres, Carolina
Costamagna, Damián Matías
Blanco Fernández, María Dolores
Mbayed, Viviana Andrea
author_facet Barrios, Melina Elizabeth
Díaz, Sofía Micaela
Torres, Carolina
Costamagna, Damián Matías
Blanco Fernández, María Dolores
Mbayed, Viviana Andrea
author_sort Barrios, Melina Elizabeth
collection PubMed
description In the current pandemic of COVID-19, sewage surveillance of SARS-CoV-2 genome has been used to complement viral epidemiology in different countries. The aim of this work was to introduce and evaluate this wastewater-based tool in the metropolitan region of Buenos Aires, Argentina. As a pilot study, surveillance of SARS-CoV-2 in wastewater from three districts of this area was performed for more than nine months from June 2020 to April 2021. Viruses present in the samples were concentrated using polyethylene glycol precipitation and quantified using RT-qPCR CDC N1 assay. Virus recovery for SARS-CoV-2 and a potential surrogate, bovine coronavirus Mebus strain, that shares the Betacoronavirus genus and structural characteristics with SARS-CoV-2, were evaluated after concentration and detection procedures. Recovery of both viruses did not differ significantly, with a median for SARS-CoV-2 and BCoV of 0.085 (95% CI: 0.021-0.179) and 0.262 (95% CI: 1.18 × 10(-5)-0.564) respectively. The concentration of SARS-CoV-2 genome in wastewater ranged from 10 (-1) to 10 (3) cg/ml, depending on the wastewater treatment plant, type of collection site, viral recovery of the concentration method and the epidemiological situation of the outbreaks. Significant correlations were observed between SARS-CoV-2 concentration in wastewater and reported clinical cases, reinforcing the utility of this approach to monitor the epidemiological status of populations.
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spelling pubmed-83595662021-08-12 Dynamics of SARS-CoV-2 in wastewater in three districts of the Buenos Aires metropolitan region, Argentina, throughout nine months of surveillance: A pilot study Barrios, Melina Elizabeth Díaz, Sofía Micaela Torres, Carolina Costamagna, Damián Matías Blanco Fernández, María Dolores Mbayed, Viviana Andrea Sci Total Environ Article In the current pandemic of COVID-19, sewage surveillance of SARS-CoV-2 genome has been used to complement viral epidemiology in different countries. The aim of this work was to introduce and evaluate this wastewater-based tool in the metropolitan region of Buenos Aires, Argentina. As a pilot study, surveillance of SARS-CoV-2 in wastewater from three districts of this area was performed for more than nine months from June 2020 to April 2021. Viruses present in the samples were concentrated using polyethylene glycol precipitation and quantified using RT-qPCR CDC N1 assay. Virus recovery for SARS-CoV-2 and a potential surrogate, bovine coronavirus Mebus strain, that shares the Betacoronavirus genus and structural characteristics with SARS-CoV-2, were evaluated after concentration and detection procedures. Recovery of both viruses did not differ significantly, with a median for SARS-CoV-2 and BCoV of 0.085 (95% CI: 0.021-0.179) and 0.262 (95% CI: 1.18 × 10(-5)-0.564) respectively. The concentration of SARS-CoV-2 genome in wastewater ranged from 10 (-1) to 10 (3) cg/ml, depending on the wastewater treatment plant, type of collection site, viral recovery of the concentration method and the epidemiological situation of the outbreaks. Significant correlations were observed between SARS-CoV-2 concentration in wastewater and reported clinical cases, reinforcing the utility of this approach to monitor the epidemiological status of populations. Elsevier B.V. 2021-12-15 2021-08-12 /pmc/articles/PMC8359566/ /pubmed/34426365 http://dx.doi.org/10.1016/j.scitotenv.2021.149578 Text en © 2021 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Barrios, Melina Elizabeth
Díaz, Sofía Micaela
Torres, Carolina
Costamagna, Damián Matías
Blanco Fernández, María Dolores
Mbayed, Viviana Andrea
Dynamics of SARS-CoV-2 in wastewater in three districts of the Buenos Aires metropolitan region, Argentina, throughout nine months of surveillance: A pilot study
title Dynamics of SARS-CoV-2 in wastewater in three districts of the Buenos Aires metropolitan region, Argentina, throughout nine months of surveillance: A pilot study
title_full Dynamics of SARS-CoV-2 in wastewater in three districts of the Buenos Aires metropolitan region, Argentina, throughout nine months of surveillance: A pilot study
title_fullStr Dynamics of SARS-CoV-2 in wastewater in three districts of the Buenos Aires metropolitan region, Argentina, throughout nine months of surveillance: A pilot study
title_full_unstemmed Dynamics of SARS-CoV-2 in wastewater in three districts of the Buenos Aires metropolitan region, Argentina, throughout nine months of surveillance: A pilot study
title_short Dynamics of SARS-CoV-2 in wastewater in three districts of the Buenos Aires metropolitan region, Argentina, throughout nine months of surveillance: A pilot study
title_sort dynamics of sars-cov-2 in wastewater in three districts of the buenos aires metropolitan region, argentina, throughout nine months of surveillance: a pilot study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8359566/
https://www.ncbi.nlm.nih.gov/pubmed/34426365
http://dx.doi.org/10.1016/j.scitotenv.2021.149578
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