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Determination of critical decision points for COVID-19 measures in Japan

Coronavirus disease 2019 (COVID-19) has spread throughout the world. The prediction of the number of cases has become essential to governments’ ability to define policies and take countermeasures in advance. The numbers of cases have been estimated using compartment models of infectious diseases suc...

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Autores principales: Kim, Junu, Matsunami, Kensaku, Okamura, Kozue, Badr, Sara, Sugiyama, Hirokazu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8361112/
https://www.ncbi.nlm.nih.gov/pubmed/34385518
http://dx.doi.org/10.1038/s41598-021-95617-z
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author Kim, Junu
Matsunami, Kensaku
Okamura, Kozue
Badr, Sara
Sugiyama, Hirokazu
author_facet Kim, Junu
Matsunami, Kensaku
Okamura, Kozue
Badr, Sara
Sugiyama, Hirokazu
author_sort Kim, Junu
collection PubMed
description Coronavirus disease 2019 (COVID-19) has spread throughout the world. The prediction of the number of cases has become essential to governments’ ability to define policies and take countermeasures in advance. The numbers of cases have been estimated using compartment models of infectious diseases such as the susceptible-infected-removed (SIR) model and its derived models. However, the required use of hypothetical future values for parameters, such as the effective reproduction number or infection rate, increases the uncertainty of the prediction results. Here, we describe our model for forecasting future COVID-19 cases based on observed data by considering the time delay (t(delay)). We used machine learning to estimate the future infection rate based on real-time mobility, temperature, and relative humidity. We then used this calculation with the susceptible-exposed-infectious-removed (SEIR) model to forecast future cases with less uncertainty. The results suggest that changes in mobility affect observed infection rates with 5–10 days of time delay. This window should be accounted for in the decision-making phase especially during periods with predicted infection surges. Our prediction model helps governments and medical institutions to take targeted early countermeasures at critical decision points regarding mobility to avoid significant levels of infection rise.
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spelling pubmed-83611122021-08-17 Determination of critical decision points for COVID-19 measures in Japan Kim, Junu Matsunami, Kensaku Okamura, Kozue Badr, Sara Sugiyama, Hirokazu Sci Rep Article Coronavirus disease 2019 (COVID-19) has spread throughout the world. The prediction of the number of cases has become essential to governments’ ability to define policies and take countermeasures in advance. The numbers of cases have been estimated using compartment models of infectious diseases such as the susceptible-infected-removed (SIR) model and its derived models. However, the required use of hypothetical future values for parameters, such as the effective reproduction number or infection rate, increases the uncertainty of the prediction results. Here, we describe our model for forecasting future COVID-19 cases based on observed data by considering the time delay (t(delay)). We used machine learning to estimate the future infection rate based on real-time mobility, temperature, and relative humidity. We then used this calculation with the susceptible-exposed-infectious-removed (SEIR) model to forecast future cases with less uncertainty. The results suggest that changes in mobility affect observed infection rates with 5–10 days of time delay. This window should be accounted for in the decision-making phase especially during periods with predicted infection surges. Our prediction model helps governments and medical institutions to take targeted early countermeasures at critical decision points regarding mobility to avoid significant levels of infection rise. Nature Publishing Group UK 2021-08-12 /pmc/articles/PMC8361112/ /pubmed/34385518 http://dx.doi.org/10.1038/s41598-021-95617-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kim, Junu
Matsunami, Kensaku
Okamura, Kozue
Badr, Sara
Sugiyama, Hirokazu
Determination of critical decision points for COVID-19 measures in Japan
title Determination of critical decision points for COVID-19 measures in Japan
title_full Determination of critical decision points for COVID-19 measures in Japan
title_fullStr Determination of critical decision points for COVID-19 measures in Japan
title_full_unstemmed Determination of critical decision points for COVID-19 measures in Japan
title_short Determination of critical decision points for COVID-19 measures in Japan
title_sort determination of critical decision points for covid-19 measures in japan
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8361112/
https://www.ncbi.nlm.nih.gov/pubmed/34385518
http://dx.doi.org/10.1038/s41598-021-95617-z
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