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Glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns
Glycans are a major composition of the cell surface that interacts with the surrounding environment. The ability to carry out glycan-binding profile studies has been mainly done with glycan arrays. However, glycan arrays are not easily adaptable for cell surface and in vivo glycan recognition assays...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8361188/ https://www.ncbi.nlm.nih.gov/pubmed/34385576 http://dx.doi.org/10.1038/s42003-021-02474-7 |
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author | Lim, Theam Soon Montague-Cardoso, Karli |
author_facet | Lim, Theam Soon Montague-Cardoso, Karli |
author_sort | Lim, Theam Soon |
collection | PubMed |
description | Glycans are a major composition of the cell surface that interacts with the surrounding environment. The ability to carry out glycan-binding profile studies has been mainly done with glycan arrays. However, glycan arrays are not easily adaptable for cell surface and in vivo glycan recognition assays. The Liquid Glycan Array (LiGA) reported recently by Sojitra et al. is an alternative glycan recognition assay that employs DNA barcoding, bioorthogonal ligation and deep sequencing technology. In LiGA, barcoded M13 virions are used to present glycans to allow rapid identification of binding partners based on sequence identity. This physical link between the glycan to the DNA sequence fitted in the phage genome provides an ingenious approach to maneuver glycan binding profile studies in various conditions. |
format | Online Article Text |
id | pubmed-8361188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-83611882021-08-19 Glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns Lim, Theam Soon Montague-Cardoso, Karli Commun Biol Research Highlight Glycans are a major composition of the cell surface that interacts with the surrounding environment. The ability to carry out glycan-binding profile studies has been mainly done with glycan arrays. However, glycan arrays are not easily adaptable for cell surface and in vivo glycan recognition assays. The Liquid Glycan Array (LiGA) reported recently by Sojitra et al. is an alternative glycan recognition assay that employs DNA barcoding, bioorthogonal ligation and deep sequencing technology. In LiGA, barcoded M13 virions are used to present glycans to allow rapid identification of binding partners based on sequence identity. This physical link between the glycan to the DNA sequence fitted in the phage genome provides an ingenious approach to maneuver glycan binding profile studies in various conditions. Nature Publishing Group UK 2021-08-12 /pmc/articles/PMC8361188/ /pubmed/34385576 http://dx.doi.org/10.1038/s42003-021-02474-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Highlight Lim, Theam Soon Montague-Cardoso, Karli Glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns |
title | Glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns |
title_full | Glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns |
title_fullStr | Glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns |
title_full_unstemmed | Glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns |
title_short | Glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns |
title_sort | glycans housed by a bacteriophage enable rapid identification of glycan recognition patterns |
topic | Research Highlight |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8361188/ https://www.ncbi.nlm.nih.gov/pubmed/34385576 http://dx.doi.org/10.1038/s42003-021-02474-7 |
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