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Application of the hollow fibre infection model (HFIM) in antimicrobial development: a systematic review and recommendations of reporting
OBJECTIVES: This systematic review focuses on the use of the in vitro hollow fibre infection model (HFIM) for microbial culture. We summarize the direction of the field to date and propose best-practice principles for reporting of the applications. METHODS: Searches in six databases (MEDLINE(®), EMB...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8361333/ https://www.ncbi.nlm.nih.gov/pubmed/34179966 http://dx.doi.org/10.1093/jac/dkab160 |
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author | Sadouki, Zahra McHugh, Timothy D. Aarnoutse, Rob Ortiz Canseco, Julio Darlow, Christopher Hope, William van Ingen, Jakko Longshaw, Christopher Manissero, Davide Mead, Andrew Pelligand, Ludovic Phee, Lynette Readman, John Ruth, Mike M. Standing, Joseph F. Stone, Neil Wey, Emmanuel Q. Kloprogge, Frank |
author_facet | Sadouki, Zahra McHugh, Timothy D. Aarnoutse, Rob Ortiz Canseco, Julio Darlow, Christopher Hope, William van Ingen, Jakko Longshaw, Christopher Manissero, Davide Mead, Andrew Pelligand, Ludovic Phee, Lynette Readman, John Ruth, Mike M. Standing, Joseph F. Stone, Neil Wey, Emmanuel Q. Kloprogge, Frank |
author_sort | Sadouki, Zahra |
collection | PubMed |
description | OBJECTIVES: This systematic review focuses on the use of the in vitro hollow fibre infection model (HFIM) for microbial culture. We summarize the direction of the field to date and propose best-practice principles for reporting of the applications. METHODS: Searches in six databases (MEDLINE(®), EMBASE(®), PubMed(®), BIOSIS(®), SCOPUS(®) and Cochrane(®)) up to January 2020 identified 129 studies meeting our inclusion criteria. Two reviewers independently assessed and extracted data from each publication. The quality of reporting of microbiological and technical parameters was analysed. RESULTS: Forty-seven out of 129 (36.4%) studies did not report the minimum pharmacokinetic parameters required in order to replicate the pharmacokinetic profile of HFIM experiments. Fifty-three out of 129 (41.1%) publications did not report the medium used in the HFIM. The overwhelming majority of publications did not perform any technical repeats [107/129 (82.9%)] or biological repeats [97/129 (75.2%)]. CONCLUSIONS: This review demonstrates that most publications provide insufficient data to allow for results to be evaluated, thus impairing the reproducibility of HFIM experiments. Therefore, there is a clear need for the development of laboratory standardization and improved reporting of HFIM experiments. |
format | Online Article Text |
id | pubmed-8361333 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-83613332021-08-13 Application of the hollow fibre infection model (HFIM) in antimicrobial development: a systematic review and recommendations of reporting Sadouki, Zahra McHugh, Timothy D. Aarnoutse, Rob Ortiz Canseco, Julio Darlow, Christopher Hope, William van Ingen, Jakko Longshaw, Christopher Manissero, Davide Mead, Andrew Pelligand, Ludovic Phee, Lynette Readman, John Ruth, Mike M. Standing, Joseph F. Stone, Neil Wey, Emmanuel Q. Kloprogge, Frank J Antimicrob Chemother Systematic Review OBJECTIVES: This systematic review focuses on the use of the in vitro hollow fibre infection model (HFIM) for microbial culture. We summarize the direction of the field to date and propose best-practice principles for reporting of the applications. METHODS: Searches in six databases (MEDLINE(®), EMBASE(®), PubMed(®), BIOSIS(®), SCOPUS(®) and Cochrane(®)) up to January 2020 identified 129 studies meeting our inclusion criteria. Two reviewers independently assessed and extracted data from each publication. The quality of reporting of microbiological and technical parameters was analysed. RESULTS: Forty-seven out of 129 (36.4%) studies did not report the minimum pharmacokinetic parameters required in order to replicate the pharmacokinetic profile of HFIM experiments. Fifty-three out of 129 (41.1%) publications did not report the medium used in the HFIM. The overwhelming majority of publications did not perform any technical repeats [107/129 (82.9%)] or biological repeats [97/129 (75.2%)]. CONCLUSIONS: This review demonstrates that most publications provide insufficient data to allow for results to be evaluated, thus impairing the reproducibility of HFIM experiments. Therefore, there is a clear need for the development of laboratory standardization and improved reporting of HFIM experiments. Oxford University Press 2021-06-28 /pmc/articles/PMC8361333/ /pubmed/34179966 http://dx.doi.org/10.1093/jac/dkab160 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Systematic Review Sadouki, Zahra McHugh, Timothy D. Aarnoutse, Rob Ortiz Canseco, Julio Darlow, Christopher Hope, William van Ingen, Jakko Longshaw, Christopher Manissero, Davide Mead, Andrew Pelligand, Ludovic Phee, Lynette Readman, John Ruth, Mike M. Standing, Joseph F. Stone, Neil Wey, Emmanuel Q. Kloprogge, Frank Application of the hollow fibre infection model (HFIM) in antimicrobial development: a systematic review and recommendations of reporting |
title | Application of the hollow fibre infection model (HFIM) in antimicrobial development: a systematic review and recommendations of reporting |
title_full | Application of the hollow fibre infection model (HFIM) in antimicrobial development: a systematic review and recommendations of reporting |
title_fullStr | Application of the hollow fibre infection model (HFIM) in antimicrobial development: a systematic review and recommendations of reporting |
title_full_unstemmed | Application of the hollow fibre infection model (HFIM) in antimicrobial development: a systematic review and recommendations of reporting |
title_short | Application of the hollow fibre infection model (HFIM) in antimicrobial development: a systematic review and recommendations of reporting |
title_sort | application of the hollow fibre infection model (hfim) in antimicrobial development: a systematic review and recommendations of reporting |
topic | Systematic Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8361333/ https://www.ncbi.nlm.nih.gov/pubmed/34179966 http://dx.doi.org/10.1093/jac/dkab160 |
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