Cargando…
OVarFlow: a resource optimized GATK 4 based Open source Variant calling workFlow
BACKGROUND: The advent of next generation sequencing has opened new avenues for basic and applied research. One application is the discovery of sequence variants causative of a phenotypic trait or a disease pathology. The computational task of detecting and annotating sequence differences of a targe...
Autores principales: | Bathke, Jochen, Lühken, Gesine |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8361789/ https://www.ncbi.nlm.nih.gov/pubmed/34388963 http://dx.doi.org/10.1186/s12859-021-04317-y |
Ejemplares similares
-
Optimizing performance of GATK workflows using Apache Arrow In-Memory data framework
por: Ahmad, Tanveer, et al.
Publicado: (2020) -
Recommendations for performance optimizations when using GATK3.8 and GATK4
por: Heldenbrand, Jacob R, et al.
Publicado: (2019) -
The GATK joint genotyping workflow is appropriate for calling variants in RNA-seq experiments
por: Brouard, Jean-Simon, et al.
Publicado: (2019) -
Ovaritis
por: Duncan, J. Matthews
Publicado: (1871) -
TRENTOOL: A Matlab open source toolbox to analyse information flow in time series data with transfer entropy
por: Lindner, Michael, et al.
Publicado: (2011)