Cargando…

Nocathioamides, Uncovered by a Tunable Metabologenomic Approach, Define a Novel Class of Chimeric Lanthipeptides

The increasing number of available genomes, in combination with advanced genome mining techniques, unveiled a plethora of biosynthetic gene clusters (BGCs) coding for ribosomally synthesized and post‐translationally modified peptides (RiPPs). The products of these BGCs often represent an enormous re...

Descripción completa

Detalles Bibliográficos
Autores principales: Saad, Hamada, Aziz, Saefuddin, Gehringer, Matthias, Kramer, Markus, Straetener, Jan, Berscheid, Anne, Brötz‐Oesterhelt, Heike, Gross, Harald
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8362196/
https://www.ncbi.nlm.nih.gov/pubmed/33991039
http://dx.doi.org/10.1002/anie.202102571
_version_ 1783738111546621952
author Saad, Hamada
Aziz, Saefuddin
Gehringer, Matthias
Kramer, Markus
Straetener, Jan
Berscheid, Anne
Brötz‐Oesterhelt, Heike
Gross, Harald
author_facet Saad, Hamada
Aziz, Saefuddin
Gehringer, Matthias
Kramer, Markus
Straetener, Jan
Berscheid, Anne
Brötz‐Oesterhelt, Heike
Gross, Harald
author_sort Saad, Hamada
collection PubMed
description The increasing number of available genomes, in combination with advanced genome mining techniques, unveiled a plethora of biosynthetic gene clusters (BGCs) coding for ribosomally synthesized and post‐translationally modified peptides (RiPPs). The products of these BGCs often represent an enormous resource for new and bioactive compounds, but frequently, they cannot be readily isolated and remain cryptic. Here, we describe a tunable metabologenomic approach that recruits a synergism of bioinformatics in tandem with isotope‐ and NMR‐guided platform to identify the product of an orphan RiPP gene cluster in the genomes of Nocardia terpenica IFM 0406 and 0706(T). The application of this tactic resulted in the discovery of nocathioamides family as a founder of a new class of chimeric lanthipeptides I.
format Online
Article
Text
id pubmed-8362196
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-83621962021-08-17 Nocathioamides, Uncovered by a Tunable Metabologenomic Approach, Define a Novel Class of Chimeric Lanthipeptides Saad, Hamada Aziz, Saefuddin Gehringer, Matthias Kramer, Markus Straetener, Jan Berscheid, Anne Brötz‐Oesterhelt, Heike Gross, Harald Angew Chem Int Ed Engl Research Articles The increasing number of available genomes, in combination with advanced genome mining techniques, unveiled a plethora of biosynthetic gene clusters (BGCs) coding for ribosomally synthesized and post‐translationally modified peptides (RiPPs). The products of these BGCs often represent an enormous resource for new and bioactive compounds, but frequently, they cannot be readily isolated and remain cryptic. Here, we describe a tunable metabologenomic approach that recruits a synergism of bioinformatics in tandem with isotope‐ and NMR‐guided platform to identify the product of an orphan RiPP gene cluster in the genomes of Nocardia terpenica IFM 0406 and 0706(T). The application of this tactic resulted in the discovery of nocathioamides family as a founder of a new class of chimeric lanthipeptides I. John Wiley and Sons Inc. 2021-06-17 2021-07-19 /pmc/articles/PMC8362196/ /pubmed/33991039 http://dx.doi.org/10.1002/anie.202102571 Text en © 2021 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Articles
Saad, Hamada
Aziz, Saefuddin
Gehringer, Matthias
Kramer, Markus
Straetener, Jan
Berscheid, Anne
Brötz‐Oesterhelt, Heike
Gross, Harald
Nocathioamides, Uncovered by a Tunable Metabologenomic Approach, Define a Novel Class of Chimeric Lanthipeptides
title Nocathioamides, Uncovered by a Tunable Metabologenomic Approach, Define a Novel Class of Chimeric Lanthipeptides
title_full Nocathioamides, Uncovered by a Tunable Metabologenomic Approach, Define a Novel Class of Chimeric Lanthipeptides
title_fullStr Nocathioamides, Uncovered by a Tunable Metabologenomic Approach, Define a Novel Class of Chimeric Lanthipeptides
title_full_unstemmed Nocathioamides, Uncovered by a Tunable Metabologenomic Approach, Define a Novel Class of Chimeric Lanthipeptides
title_short Nocathioamides, Uncovered by a Tunable Metabologenomic Approach, Define a Novel Class of Chimeric Lanthipeptides
title_sort nocathioamides, uncovered by a tunable metabologenomic approach, define a novel class of chimeric lanthipeptides
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8362196/
https://www.ncbi.nlm.nih.gov/pubmed/33991039
http://dx.doi.org/10.1002/anie.202102571
work_keys_str_mv AT saadhamada nocathioamidesuncoveredbyatunablemetabologenomicapproachdefineanovelclassofchimericlanthipeptides
AT azizsaefuddin nocathioamidesuncoveredbyatunablemetabologenomicapproachdefineanovelclassofchimericlanthipeptides
AT gehringermatthias nocathioamidesuncoveredbyatunablemetabologenomicapproachdefineanovelclassofchimericlanthipeptides
AT kramermarkus nocathioamidesuncoveredbyatunablemetabologenomicapproachdefineanovelclassofchimericlanthipeptides
AT straetenerjan nocathioamidesuncoveredbyatunablemetabologenomicapproachdefineanovelclassofchimericlanthipeptides
AT berscheidanne nocathioamidesuncoveredbyatunablemetabologenomicapproachdefineanovelclassofchimericlanthipeptides
AT brotzoesterheltheike nocathioamidesuncoveredbyatunablemetabologenomicapproachdefineanovelclassofchimericlanthipeptides
AT grossharald nocathioamidesuncoveredbyatunablemetabologenomicapproachdefineanovelclassofchimericlanthipeptides