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Accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps
While energy-structure-function (ESF) maps are a powerful new tool for in silico materials design, the cost of acquiring an ESF map for many properties is too high for routine integration into high-throughput virtual screening workflows. Here, we propose the next evolution of the ESF map. This uses...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Association for the Advancement of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8363149/ https://www.ncbi.nlm.nih.gov/pubmed/34389543 http://dx.doi.org/10.1126/sciadv.abi4763 |
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author | Pyzer-Knapp, Edward O. Chen, Linjiang Day, Graeme M. Cooper, Andrew I. |
author_facet | Pyzer-Knapp, Edward O. Chen, Linjiang Day, Graeme M. Cooper, Andrew I. |
author_sort | Pyzer-Knapp, Edward O. |
collection | PubMed |
description | While energy-structure-function (ESF) maps are a powerful new tool for in silico materials design, the cost of acquiring an ESF map for many properties is too high for routine integration into high-throughput virtual screening workflows. Here, we propose the next evolution of the ESF map. This uses parallel Bayesian optimization to selectively acquire energy and property data, generating the same levels of insight at a fraction of the computational cost. We use this approach to obtain a two orders of magnitude speedup on an ESF study that focused on the discovery of molecular crystals for methane capture, saving more than 500,000 central processing unit hours from the original protocol. By accelerating the acquisition of insight from ESF maps, we pave the way for the use of these maps in automated ultrahigh-throughput screening pipelines by greatly reducing the opportunity risk associated with the choice of system to calculate. |
format | Online Article Text |
id | pubmed-8363149 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Association for the Advancement of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-83631492021-08-20 Accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps Pyzer-Knapp, Edward O. Chen, Linjiang Day, Graeme M. Cooper, Andrew I. Sci Adv Research Articles While energy-structure-function (ESF) maps are a powerful new tool for in silico materials design, the cost of acquiring an ESF map for many properties is too high for routine integration into high-throughput virtual screening workflows. Here, we propose the next evolution of the ESF map. This uses parallel Bayesian optimization to selectively acquire energy and property data, generating the same levels of insight at a fraction of the computational cost. We use this approach to obtain a two orders of magnitude speedup on an ESF study that focused on the discovery of molecular crystals for methane capture, saving more than 500,000 central processing unit hours from the original protocol. By accelerating the acquisition of insight from ESF maps, we pave the way for the use of these maps in automated ultrahigh-throughput screening pipelines by greatly reducing the opportunity risk associated with the choice of system to calculate. American Association for the Advancement of Science 2021-08-13 /pmc/articles/PMC8363149/ /pubmed/34389543 http://dx.doi.org/10.1126/sciadv.abi4763 Text en Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Pyzer-Knapp, Edward O. Chen, Linjiang Day, Graeme M. Cooper, Andrew I. Accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps |
title | Accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps |
title_full | Accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps |
title_fullStr | Accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps |
title_full_unstemmed | Accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps |
title_short | Accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps |
title_sort | accelerating computational discovery of porous solids through improved navigation of energy-structure-function maps |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8363149/ https://www.ncbi.nlm.nih.gov/pubmed/34389543 http://dx.doi.org/10.1126/sciadv.abi4763 |
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