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Real-time label-free detection of DNA hybridization using a functionalized graphene field effect transistor: a theoretical study
Detection of DNA hybridization with high sensitivity and accuracy plays a major role in clinical diagnosis and treatment. Despite intense experimental studies of graphene field effect transistor as DNA hybridization detector, the mechanism of detection and changes in the electrical properties of the...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8365298/ https://www.ncbi.nlm.nih.gov/pubmed/34421338 http://dx.doi.org/10.1007/s11051-021-05295-1 |
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author | Bagherzadeh-Nobari, Sheida Kalantarinejad, Reza |
author_facet | Bagherzadeh-Nobari, Sheida Kalantarinejad, Reza |
author_sort | Bagherzadeh-Nobari, Sheida |
collection | PubMed |
description | Detection of DNA hybridization with high sensitivity and accuracy plays a major role in clinical diagnosis and treatment. Despite intense experimental studies of graphene field effect transistor as DNA hybridization detector, the mechanism of detection and changes in the electrical properties of the device is not investigated in detail. To this end, we have investigated an armchair graphene nanoribbon (AGNR) interconnected between gold electrodes as a detector of DNA hybridization. Using non-equilibrium Green’s function method and density functional theory, the effect of 1-pyrenebutanoic acid succinimidyl ester (PBASE) linker, probe, and target DNA on the electrical properties of the device has been investigated at zero bias voltage. The results show that, after functionalization of AGNR with PBASE, the conductance of the device increases while functionalization with probe and target DNA leads to a decrease in conductance. The changes in the projected density of states on the AGNR and transmission around Fermi energy are the reason for the change in conductance of the system. In all cases, both charge transfer and electrostatic gating are responsible for the change in the electrical properties of the system. The results show that our device detects DNA hybridization with a sensitivity of 10% at zero bias voltage, and by applying a suitable gate voltage, it can show higher sensitivity. GRAPHICAL ABSTRACT: [Image: see text] |
format | Online Article Text |
id | pubmed-8365298 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-83652982021-08-16 Real-time label-free detection of DNA hybridization using a functionalized graphene field effect transistor: a theoretical study Bagherzadeh-Nobari, Sheida Kalantarinejad, Reza J Nanopart Res Research Paper Detection of DNA hybridization with high sensitivity and accuracy plays a major role in clinical diagnosis and treatment. Despite intense experimental studies of graphene field effect transistor as DNA hybridization detector, the mechanism of detection and changes in the electrical properties of the device is not investigated in detail. To this end, we have investigated an armchair graphene nanoribbon (AGNR) interconnected between gold electrodes as a detector of DNA hybridization. Using non-equilibrium Green’s function method and density functional theory, the effect of 1-pyrenebutanoic acid succinimidyl ester (PBASE) linker, probe, and target DNA on the electrical properties of the device has been investigated at zero bias voltage. The results show that, after functionalization of AGNR with PBASE, the conductance of the device increases while functionalization with probe and target DNA leads to a decrease in conductance. The changes in the projected density of states on the AGNR and transmission around Fermi energy are the reason for the change in conductance of the system. In all cases, both charge transfer and electrostatic gating are responsible for the change in the electrical properties of the system. The results show that our device detects DNA hybridization with a sensitivity of 10% at zero bias voltage, and by applying a suitable gate voltage, it can show higher sensitivity. GRAPHICAL ABSTRACT: [Image: see text] Springer Netherlands 2021-08-16 2021 /pmc/articles/PMC8365298/ /pubmed/34421338 http://dx.doi.org/10.1007/s11051-021-05295-1 Text en © The Author(s), under exclusive licence to Springer Nature B.V. 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Research Paper Bagherzadeh-Nobari, Sheida Kalantarinejad, Reza Real-time label-free detection of DNA hybridization using a functionalized graphene field effect transistor: a theoretical study |
title | Real-time label-free detection of DNA hybridization using a functionalized graphene field effect transistor: a theoretical study |
title_full | Real-time label-free detection of DNA hybridization using a functionalized graphene field effect transistor: a theoretical study |
title_fullStr | Real-time label-free detection of DNA hybridization using a functionalized graphene field effect transistor: a theoretical study |
title_full_unstemmed | Real-time label-free detection of DNA hybridization using a functionalized graphene field effect transistor: a theoretical study |
title_short | Real-time label-free detection of DNA hybridization using a functionalized graphene field effect transistor: a theoretical study |
title_sort | real-time label-free detection of dna hybridization using a functionalized graphene field effect transistor: a theoretical study |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8365298/ https://www.ncbi.nlm.nih.gov/pubmed/34421338 http://dx.doi.org/10.1007/s11051-021-05295-1 |
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