Cargando…

Rapid and Visual Differentiation of Mycobacterium tuberculosis From the Mycobacterium tuberculosis Complex Using Multiplex Loop-Mediated Isothermal Amplification Coupled With a Nanoparticle-Based Lateral Flow Biosensor

Tuberculosis (TB) is a chronic infectious disease mainly caused by Mycobacterium tuberculosis (MTB), but other members of the Mycobacterium tuberculosis complex (MTBC), especially Mycobacterium bovis (pyrazinamide-resistant organisms), may also be involved. Thus, the ability to rapidly detect and id...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Xinggui, Huang, Junfei, Chen, Xu, Xiao, Ziyu, Wang, Xiaojuan, Chen, Yijiang, Zheng, Wenlin, Chen, Wei, Chen, Huijuan, Lei, Shiguang, Hu, Yong, Li, Shijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8365424/
https://www.ncbi.nlm.nih.gov/pubmed/34408738
http://dx.doi.org/10.3389/fmicb.2021.708658
_version_ 1783738705374085120
author Yang, Xinggui
Huang, Junfei
Chen, Xu
Xiao, Ziyu
Wang, Xiaojuan
Chen, Yijiang
Zheng, Wenlin
Chen, Wei
Chen, Huijuan
Lei, Shiguang
Hu, Yong
Li, Shijun
author_facet Yang, Xinggui
Huang, Junfei
Chen, Xu
Xiao, Ziyu
Wang, Xiaojuan
Chen, Yijiang
Zheng, Wenlin
Chen, Wei
Chen, Huijuan
Lei, Shiguang
Hu, Yong
Li, Shijun
author_sort Yang, Xinggui
collection PubMed
description Tuberculosis (TB) is a chronic infectious disease mainly caused by Mycobacterium tuberculosis (MTB), but other members of the Mycobacterium tuberculosis complex (MTBC), especially Mycobacterium bovis (pyrazinamide-resistant organisms), may also be involved. Thus, the ability to rapidly detect and identify MTB from other MTBC members (e.g., M. bovis, Mycobacterium microti, Mycobacterium africanum) is essential for the prevention and treatment of TB. A novel diagnostic method for the rapid detection and differentiation of MTB, which employs multiplex loop-mediated isothermal amplification (mLAMP) combined with a nanoparticle-based lateral flow biosensor (LFB), was established (mLAMP-LFB). Two sets of specific primers that target the IS6110 and mtp40 genes were designed according to the principle of LAMP. Various pathogens were used to optimize and evaluate the mLAMP-LFB assay. The optimal conditions for mLAMP-LFB were determined to be 66°C and 40 min, and the amplicons were directly verified by observing the test lines on the biosensor. The LAMP assay limit of detection (LoD) was 125 fg per vessel for the pure genomic DNA of MTB and 4.8 × 10(3) CFU/ml for the sputum samples, and the analytical specificity was 100%. In addition, the whole process, including the clinical specimen processing (35 min), isothermal amplification (40 min), and result confirmation (1–2 min), could be completed in approximately 80 min. Thus, mLAMP-LFB is a rapid, reliable, and sensitive method that is able to detect representative members of MTBC and simultaneously differentiate MTB from other MTBC members, and it can be used as a potential screening tool for TB in clinical, field, and basic laboratory settings.
format Online
Article
Text
id pubmed-8365424
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-83654242021-08-17 Rapid and Visual Differentiation of Mycobacterium tuberculosis From the Mycobacterium tuberculosis Complex Using Multiplex Loop-Mediated Isothermal Amplification Coupled With a Nanoparticle-Based Lateral Flow Biosensor Yang, Xinggui Huang, Junfei Chen, Xu Xiao, Ziyu Wang, Xiaojuan Chen, Yijiang Zheng, Wenlin Chen, Wei Chen, Huijuan Lei, Shiguang Hu, Yong Li, Shijun Front Microbiol Microbiology Tuberculosis (TB) is a chronic infectious disease mainly caused by Mycobacterium tuberculosis (MTB), but other members of the Mycobacterium tuberculosis complex (MTBC), especially Mycobacterium bovis (pyrazinamide-resistant organisms), may also be involved. Thus, the ability to rapidly detect and identify MTB from other MTBC members (e.g., M. bovis, Mycobacterium microti, Mycobacterium africanum) is essential for the prevention and treatment of TB. A novel diagnostic method for the rapid detection and differentiation of MTB, which employs multiplex loop-mediated isothermal amplification (mLAMP) combined with a nanoparticle-based lateral flow biosensor (LFB), was established (mLAMP-LFB). Two sets of specific primers that target the IS6110 and mtp40 genes were designed according to the principle of LAMP. Various pathogens were used to optimize and evaluate the mLAMP-LFB assay. The optimal conditions for mLAMP-LFB were determined to be 66°C and 40 min, and the amplicons were directly verified by observing the test lines on the biosensor. The LAMP assay limit of detection (LoD) was 125 fg per vessel for the pure genomic DNA of MTB and 4.8 × 10(3) CFU/ml for the sputum samples, and the analytical specificity was 100%. In addition, the whole process, including the clinical specimen processing (35 min), isothermal amplification (40 min), and result confirmation (1–2 min), could be completed in approximately 80 min. Thus, mLAMP-LFB is a rapid, reliable, and sensitive method that is able to detect representative members of MTBC and simultaneously differentiate MTB from other MTBC members, and it can be used as a potential screening tool for TB in clinical, field, and basic laboratory settings. Frontiers Media S.A. 2021-08-02 /pmc/articles/PMC8365424/ /pubmed/34408738 http://dx.doi.org/10.3389/fmicb.2021.708658 Text en Copyright © 2021 Yang, Huang, Chen, Xiao, Wang, Chen, Zheng, Chen, Chen, Lei, Hu and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Yang, Xinggui
Huang, Junfei
Chen, Xu
Xiao, Ziyu
Wang, Xiaojuan
Chen, Yijiang
Zheng, Wenlin
Chen, Wei
Chen, Huijuan
Lei, Shiguang
Hu, Yong
Li, Shijun
Rapid and Visual Differentiation of Mycobacterium tuberculosis From the Mycobacterium tuberculosis Complex Using Multiplex Loop-Mediated Isothermal Amplification Coupled With a Nanoparticle-Based Lateral Flow Biosensor
title Rapid and Visual Differentiation of Mycobacterium tuberculosis From the Mycobacterium tuberculosis Complex Using Multiplex Loop-Mediated Isothermal Amplification Coupled With a Nanoparticle-Based Lateral Flow Biosensor
title_full Rapid and Visual Differentiation of Mycobacterium tuberculosis From the Mycobacterium tuberculosis Complex Using Multiplex Loop-Mediated Isothermal Amplification Coupled With a Nanoparticle-Based Lateral Flow Biosensor
title_fullStr Rapid and Visual Differentiation of Mycobacterium tuberculosis From the Mycobacterium tuberculosis Complex Using Multiplex Loop-Mediated Isothermal Amplification Coupled With a Nanoparticle-Based Lateral Flow Biosensor
title_full_unstemmed Rapid and Visual Differentiation of Mycobacterium tuberculosis From the Mycobacterium tuberculosis Complex Using Multiplex Loop-Mediated Isothermal Amplification Coupled With a Nanoparticle-Based Lateral Flow Biosensor
title_short Rapid and Visual Differentiation of Mycobacterium tuberculosis From the Mycobacterium tuberculosis Complex Using Multiplex Loop-Mediated Isothermal Amplification Coupled With a Nanoparticle-Based Lateral Flow Biosensor
title_sort rapid and visual differentiation of mycobacterium tuberculosis from the mycobacterium tuberculosis complex using multiplex loop-mediated isothermal amplification coupled with a nanoparticle-based lateral flow biosensor
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8365424/
https://www.ncbi.nlm.nih.gov/pubmed/34408738
http://dx.doi.org/10.3389/fmicb.2021.708658
work_keys_str_mv AT yangxinggui rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT huangjunfei rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT chenxu rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT xiaoziyu rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT wangxiaojuan rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT chenyijiang rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT zhengwenlin rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT chenwei rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT chenhuijuan rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT leishiguang rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT huyong rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor
AT lishijun rapidandvisualdifferentiationofmycobacteriumtuberculosisfromthemycobacteriumtuberculosiscomplexusingmultiplexloopmediatedisothermalamplificationcoupledwithananoparticlebasedlateralflowbiosensor