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Integration of evidence across human and model organism studies: A meeting report

The National Institute on Drug Abuse and Joint Institute for Biological Sciences at the Oak Ridge National Laboratory hosted a meeting attended by a diverse group of scientists with expertise in substance use disorders (SUDs), computational biology, and FAIR (Findability, Accessibility, Interoperabi...

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Autores principales: Palmer, Rohan H. C., Johnson, Emma C., Won, Hyejung, Polimanti, Renato, Kapoor, Manav, Chitre, Apurva, Bogue, Molly A., Benca‐Bachman, Chelsie E., Parker, Clarissa C., Verma, Anurag, Reynolds, Timothy, Ernst, Jason, Bray, Michael, Kwon, Soo Bin, Lai, Dongbing, Quach, Bryan C., Gaddis, Nathan C., Saba, Laura, Chen, Hao, Hawrylycz, Michael, Zhang, Shan, Zhou, Yuan, Mahaffey, Spencer, Fischer, Christian, Sanchez‐Roige, Sandra, Bandrowski, Anita, Lu, Qing, Shen, Li, Philip, Vivek, Gelernter, Joel, Bierut, Laura J., Hancock, Dana B., Edenberg, Howard J., Johnson, Eric O., Nestler, Eric J., Barr, Peter B., Prins, Pjotr, Smith, Desmond J., Akbarian, Schahram, Thorgeirsson, Thorgeir, Walton, Dave, Baker, Erich, Jacobson, Daniel, Palmer, Abraham A., Miles, Michael, Chesler, Elissa J., Emerson, Jake, Agrawal, Arpana, Martone, Maryann, Williams, Robert W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8365690/
https://www.ncbi.nlm.nih.gov/pubmed/33893716
http://dx.doi.org/10.1111/gbb.12738
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author Palmer, Rohan H. C.
Johnson, Emma C.
Won, Hyejung
Polimanti, Renato
Kapoor, Manav
Chitre, Apurva
Bogue, Molly A.
Benca‐Bachman, Chelsie E.
Parker, Clarissa C.
Verma, Anurag
Reynolds, Timothy
Ernst, Jason
Bray, Michael
Kwon, Soo Bin
Lai, Dongbing
Quach, Bryan C.
Gaddis, Nathan C.
Saba, Laura
Chen, Hao
Hawrylycz, Michael
Zhang, Shan
Zhou, Yuan
Mahaffey, Spencer
Fischer, Christian
Sanchez‐Roige, Sandra
Bandrowski, Anita
Lu, Qing
Shen, Li
Philip, Vivek
Gelernter, Joel
Bierut, Laura J.
Hancock, Dana B.
Edenberg, Howard J.
Johnson, Eric O.
Nestler, Eric J.
Barr, Peter B.
Prins, Pjotr
Smith, Desmond J.
Akbarian, Schahram
Thorgeirsson, Thorgeir
Walton, Dave
Baker, Erich
Jacobson, Daniel
Palmer, Abraham A.
Miles, Michael
Chesler, Elissa J.
Emerson, Jake
Agrawal, Arpana
Martone, Maryann
Williams, Robert W.
author_facet Palmer, Rohan H. C.
Johnson, Emma C.
Won, Hyejung
Polimanti, Renato
Kapoor, Manav
Chitre, Apurva
Bogue, Molly A.
Benca‐Bachman, Chelsie E.
Parker, Clarissa C.
Verma, Anurag
Reynolds, Timothy
Ernst, Jason
Bray, Michael
Kwon, Soo Bin
Lai, Dongbing
Quach, Bryan C.
Gaddis, Nathan C.
Saba, Laura
Chen, Hao
Hawrylycz, Michael
Zhang, Shan
Zhou, Yuan
Mahaffey, Spencer
Fischer, Christian
Sanchez‐Roige, Sandra
Bandrowski, Anita
Lu, Qing
Shen, Li
Philip, Vivek
Gelernter, Joel
Bierut, Laura J.
Hancock, Dana B.
Edenberg, Howard J.
Johnson, Eric O.
Nestler, Eric J.
Barr, Peter B.
Prins, Pjotr
Smith, Desmond J.
Akbarian, Schahram
Thorgeirsson, Thorgeir
Walton, Dave
Baker, Erich
Jacobson, Daniel
Palmer, Abraham A.
Miles, Michael
Chesler, Elissa J.
Emerson, Jake
Agrawal, Arpana
Martone, Maryann
Williams, Robert W.
author_sort Palmer, Rohan H. C.
collection PubMed
description The National Institute on Drug Abuse and Joint Institute for Biological Sciences at the Oak Ridge National Laboratory hosted a meeting attended by a diverse group of scientists with expertise in substance use disorders (SUDs), computational biology, and FAIR (Findability, Accessibility, Interoperability, and Reusability) data sharing. The meeting's objective was to discuss and evaluate better strategies to integrate genetic, epigenetic, and 'omics data across human and model organisms to achieve deeper mechanistic insight into SUDs. Specific topics were to (a) evaluate the current state of substance use genetics and genomics research and fundamental gaps, (b) identify opportunities and challenges of integration and sharing across species and data types, (c) identify current tools and resources for integration of genetic, epigenetic, and phenotypic data, (d) discuss steps and impediment related to data integration, and (e) outline future steps to support more effective collaboration—particularly between animal model research communities and human genetics and clinical research teams. This review summarizes key facets of this catalytic discussion with a focus on new opportunities and gaps in resources and knowledge on SUDs.
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spelling pubmed-83656902021-08-23 Integration of evidence across human and model organism studies: A meeting report Palmer, Rohan H. C. Johnson, Emma C. Won, Hyejung Polimanti, Renato Kapoor, Manav Chitre, Apurva Bogue, Molly A. Benca‐Bachman, Chelsie E. Parker, Clarissa C. Verma, Anurag Reynolds, Timothy Ernst, Jason Bray, Michael Kwon, Soo Bin Lai, Dongbing Quach, Bryan C. Gaddis, Nathan C. Saba, Laura Chen, Hao Hawrylycz, Michael Zhang, Shan Zhou, Yuan Mahaffey, Spencer Fischer, Christian Sanchez‐Roige, Sandra Bandrowski, Anita Lu, Qing Shen, Li Philip, Vivek Gelernter, Joel Bierut, Laura J. Hancock, Dana B. Edenberg, Howard J. Johnson, Eric O. Nestler, Eric J. Barr, Peter B. Prins, Pjotr Smith, Desmond J. Akbarian, Schahram Thorgeirsson, Thorgeir Walton, Dave Baker, Erich Jacobson, Daniel Palmer, Abraham A. Miles, Michael Chesler, Elissa J. Emerson, Jake Agrawal, Arpana Martone, Maryann Williams, Robert W. Genes Brain Behav Review The National Institute on Drug Abuse and Joint Institute for Biological Sciences at the Oak Ridge National Laboratory hosted a meeting attended by a diverse group of scientists with expertise in substance use disorders (SUDs), computational biology, and FAIR (Findability, Accessibility, Interoperability, and Reusability) data sharing. The meeting's objective was to discuss and evaluate better strategies to integrate genetic, epigenetic, and 'omics data across human and model organisms to achieve deeper mechanistic insight into SUDs. Specific topics were to (a) evaluate the current state of substance use genetics and genomics research and fundamental gaps, (b) identify opportunities and challenges of integration and sharing across species and data types, (c) identify current tools and resources for integration of genetic, epigenetic, and phenotypic data, (d) discuss steps and impediment related to data integration, and (e) outline future steps to support more effective collaboration—particularly between animal model research communities and human genetics and clinical research teams. This review summarizes key facets of this catalytic discussion with a focus on new opportunities and gaps in resources and knowledge on SUDs. Blackwell Publishing Ltd 2021-06-08 2021-07 /pmc/articles/PMC8365690/ /pubmed/33893716 http://dx.doi.org/10.1111/gbb.12738 Text en © 2021 The Authors. Genes, Brain and Behavior published by International Behavioural and Neural Genetics Society and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Review
Palmer, Rohan H. C.
Johnson, Emma C.
Won, Hyejung
Polimanti, Renato
Kapoor, Manav
Chitre, Apurva
Bogue, Molly A.
Benca‐Bachman, Chelsie E.
Parker, Clarissa C.
Verma, Anurag
Reynolds, Timothy
Ernst, Jason
Bray, Michael
Kwon, Soo Bin
Lai, Dongbing
Quach, Bryan C.
Gaddis, Nathan C.
Saba, Laura
Chen, Hao
Hawrylycz, Michael
Zhang, Shan
Zhou, Yuan
Mahaffey, Spencer
Fischer, Christian
Sanchez‐Roige, Sandra
Bandrowski, Anita
Lu, Qing
Shen, Li
Philip, Vivek
Gelernter, Joel
Bierut, Laura J.
Hancock, Dana B.
Edenberg, Howard J.
Johnson, Eric O.
Nestler, Eric J.
Barr, Peter B.
Prins, Pjotr
Smith, Desmond J.
Akbarian, Schahram
Thorgeirsson, Thorgeir
Walton, Dave
Baker, Erich
Jacobson, Daniel
Palmer, Abraham A.
Miles, Michael
Chesler, Elissa J.
Emerson, Jake
Agrawal, Arpana
Martone, Maryann
Williams, Robert W.
Integration of evidence across human and model organism studies: A meeting report
title Integration of evidence across human and model organism studies: A meeting report
title_full Integration of evidence across human and model organism studies: A meeting report
title_fullStr Integration of evidence across human and model organism studies: A meeting report
title_full_unstemmed Integration of evidence across human and model organism studies: A meeting report
title_short Integration of evidence across human and model organism studies: A meeting report
title_sort integration of evidence across human and model organism studies: a meeting report
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8365690/
https://www.ncbi.nlm.nih.gov/pubmed/33893716
http://dx.doi.org/10.1111/gbb.12738
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