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Clinical Target Volume Auto-Segmentation of Esophageal Cancer for Radiotherapy After Radical Surgery Based on Deep Learning
Radiotherapy plays an important role in controlling the local recurrence of esophageal cancer after radical surgery. Segmentation of the clinical target volume is a key step in radiotherapy treatment planning, but it is time-consuming and operator-dependent. This paper introduces a deep dilated conv...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8366129/ https://www.ncbi.nlm.nih.gov/pubmed/34387104 http://dx.doi.org/10.1177/15330338211034284 |
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author | Cao, Ruifen Pei, Xi Ge, Ning Zheng, Chunhou |
author_facet | Cao, Ruifen Pei, Xi Ge, Ning Zheng, Chunhou |
author_sort | Cao, Ruifen |
collection | PubMed |
description | Radiotherapy plays an important role in controlling the local recurrence of esophageal cancer after radical surgery. Segmentation of the clinical target volume is a key step in radiotherapy treatment planning, but it is time-consuming and operator-dependent. This paper introduces a deep dilated convolutional U-network to achieve fast and accurate clinical target volume auto-segmentation of esophageal cancer after radical surgery. The deep dilated convolutional U-network, which integrates the advantages of dilated convolution and the U-network, is an end-to-end architecture that enables rapid training and testing. A dilated convolution module for extracting multiscale context features containing the original information on fine texture and boundaries is integrated into the U-network architecture to avoid information loss due to down-sampling and improve the segmentation accuracy. In addition, batch normalization is added to the deep dilated convolutional U-network for fast and stable convergence. In the present study, the training and validation loss tended to be stable after 40 training epochs. This deep dilated convolutional U-network model was able to segment the clinical target volume with an overall mean Dice similarity coefficient of 86.7% and a respective 95% Hausdorff distance of 37.4 mm, indicating reasonable volume overlap of the auto-segmented and manual contours. The mean Cohen kappa coefficient was 0.863, indicating that the deep dilated convolutional U-network was robust. Comparisons with the U-network and attention U-network showed that the overall performance of the deep dilated convolutional U-network was best for the Dice similarity coefficient, 95% Hausdorff distance, and Cohen kappa coefficient. The test time for segmentation of the clinical target volume was approximately 25 seconds per patient. This deep dilated convolutional U-network could be applied in the clinical setting to save time in delineation and improve the consistency of contouring. |
format | Online Article Text |
id | pubmed-8366129 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-83661292021-08-17 Clinical Target Volume Auto-Segmentation of Esophageal Cancer for Radiotherapy After Radical Surgery Based on Deep Learning Cao, Ruifen Pei, Xi Ge, Ning Zheng, Chunhou Technol Cancer Res Treat Original Article (Technical Edit) Radiotherapy plays an important role in controlling the local recurrence of esophageal cancer after radical surgery. Segmentation of the clinical target volume is a key step in radiotherapy treatment planning, but it is time-consuming and operator-dependent. This paper introduces a deep dilated convolutional U-network to achieve fast and accurate clinical target volume auto-segmentation of esophageal cancer after radical surgery. The deep dilated convolutional U-network, which integrates the advantages of dilated convolution and the U-network, is an end-to-end architecture that enables rapid training and testing. A dilated convolution module for extracting multiscale context features containing the original information on fine texture and boundaries is integrated into the U-network architecture to avoid information loss due to down-sampling and improve the segmentation accuracy. In addition, batch normalization is added to the deep dilated convolutional U-network for fast and stable convergence. In the present study, the training and validation loss tended to be stable after 40 training epochs. This deep dilated convolutional U-network model was able to segment the clinical target volume with an overall mean Dice similarity coefficient of 86.7% and a respective 95% Hausdorff distance of 37.4 mm, indicating reasonable volume overlap of the auto-segmented and manual contours. The mean Cohen kappa coefficient was 0.863, indicating that the deep dilated convolutional U-network was robust. Comparisons with the U-network and attention U-network showed that the overall performance of the deep dilated convolutional U-network was best for the Dice similarity coefficient, 95% Hausdorff distance, and Cohen kappa coefficient. The test time for segmentation of the clinical target volume was approximately 25 seconds per patient. This deep dilated convolutional U-network could be applied in the clinical setting to save time in delineation and improve the consistency of contouring. SAGE Publications 2021-08-13 /pmc/articles/PMC8366129/ /pubmed/34387104 http://dx.doi.org/10.1177/15330338211034284 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Article (Technical Edit) Cao, Ruifen Pei, Xi Ge, Ning Zheng, Chunhou Clinical Target Volume Auto-Segmentation of Esophageal Cancer for Radiotherapy After Radical Surgery Based on Deep Learning |
title | Clinical Target Volume Auto-Segmentation of Esophageal Cancer for Radiotherapy After Radical Surgery Based on Deep Learning |
title_full | Clinical Target Volume Auto-Segmentation of Esophageal Cancer for Radiotherapy After Radical Surgery Based on Deep Learning |
title_fullStr | Clinical Target Volume Auto-Segmentation of Esophageal Cancer for Radiotherapy After Radical Surgery Based on Deep Learning |
title_full_unstemmed | Clinical Target Volume Auto-Segmentation of Esophageal Cancer for Radiotherapy After Radical Surgery Based on Deep Learning |
title_short | Clinical Target Volume Auto-Segmentation of Esophageal Cancer for Radiotherapy After Radical Surgery Based on Deep Learning |
title_sort | clinical target volume auto-segmentation of esophageal cancer for radiotherapy after radical surgery based on deep learning |
topic | Original Article (Technical Edit) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8366129/ https://www.ncbi.nlm.nih.gov/pubmed/34387104 http://dx.doi.org/10.1177/15330338211034284 |
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