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A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening

A novel capillary-based microfluidic strategy to accelerate the process of small-molecule-compound screening by room-temperature X-ray crystallography using protein crystals is reported. The ultra-thin microfluidic devices are composed of a UV-curable polymer, patterned by cleanroom photolithography...

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Autores principales: Sui, Shuo, Mulichak, Anne, Kulathila, Raviraj, McGee, Joshua, Filiatreault, Danny, Saha, Sarthak, Cohen, Aina, Song, Jinhu, Hung, Holly, Selway, Jonathan, Kirby, Christina, Shrestha, Om K., Weihofen, Wilhelm, Fodor, Michelle, Xu, Mei, Chopra, Rajiv, Perry, Sarah L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8366422/
https://www.ncbi.nlm.nih.gov/pubmed/34429718
http://dx.doi.org/10.1107/S1600576721004155
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author Sui, Shuo
Mulichak, Anne
Kulathila, Raviraj
McGee, Joshua
Filiatreault, Danny
Saha, Sarthak
Cohen, Aina
Song, Jinhu
Hung, Holly
Selway, Jonathan
Kirby, Christina
Shrestha, Om K.
Weihofen, Wilhelm
Fodor, Michelle
Xu, Mei
Chopra, Rajiv
Perry, Sarah L.
author_facet Sui, Shuo
Mulichak, Anne
Kulathila, Raviraj
McGee, Joshua
Filiatreault, Danny
Saha, Sarthak
Cohen, Aina
Song, Jinhu
Hung, Holly
Selway, Jonathan
Kirby, Christina
Shrestha, Om K.
Weihofen, Wilhelm
Fodor, Michelle
Xu, Mei
Chopra, Rajiv
Perry, Sarah L.
author_sort Sui, Shuo
collection PubMed
description A novel capillary-based microfluidic strategy to accelerate the process of small-molecule-compound screening by room-temperature X-ray crystallography using protein crystals is reported. The ultra-thin microfluidic devices are composed of a UV-curable polymer, patterned by cleanroom photolithography, and have nine capillary channels per chip. The chip was designed for ease of sample manipulation, sample stability and minimal X-ray background. 3D-printed frames and cassettes conforming to SBS standards are used to house the capillary chips, providing additional mechanical stability and compatibility with automated liquid- and sample-handling robotics. These devices enable an innovative in situ crystal-soaking screening workflow, akin to high-throughput compound screening, such that quantitative electron density maps sufficient to determine weak binding events are efficiently obtained. This work paves the way for adopting a room-temperature microfluidics-based sample delivery method at synchrotron sources to facilitate high-throughput protein-crystallography-based screening of compounds at high concentration with the aim of discovering novel binding events in an automated manner.
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spelling pubmed-83664222021-08-23 A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening Sui, Shuo Mulichak, Anne Kulathila, Raviraj McGee, Joshua Filiatreault, Danny Saha, Sarthak Cohen, Aina Song, Jinhu Hung, Holly Selway, Jonathan Kirby, Christina Shrestha, Om K. Weihofen, Wilhelm Fodor, Michelle Xu, Mei Chopra, Rajiv Perry, Sarah L. J Appl Crystallogr Research Papers A novel capillary-based microfluidic strategy to accelerate the process of small-molecule-compound screening by room-temperature X-ray crystallography using protein crystals is reported. The ultra-thin microfluidic devices are composed of a UV-curable polymer, patterned by cleanroom photolithography, and have nine capillary channels per chip. The chip was designed for ease of sample manipulation, sample stability and minimal X-ray background. 3D-printed frames and cassettes conforming to SBS standards are used to house the capillary chips, providing additional mechanical stability and compatibility with automated liquid- and sample-handling robotics. These devices enable an innovative in situ crystal-soaking screening workflow, akin to high-throughput compound screening, such that quantitative electron density maps sufficient to determine weak binding events are efficiently obtained. This work paves the way for adopting a room-temperature microfluidics-based sample delivery method at synchrotron sources to facilitate high-throughput protein-crystallography-based screening of compounds at high concentration with the aim of discovering novel binding events in an automated manner. International Union of Crystallography 2021-06-14 /pmc/articles/PMC8366422/ /pubmed/34429718 http://dx.doi.org/10.1107/S1600576721004155 Text en © Shuo Sui et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Sui, Shuo
Mulichak, Anne
Kulathila, Raviraj
McGee, Joshua
Filiatreault, Danny
Saha, Sarthak
Cohen, Aina
Song, Jinhu
Hung, Holly
Selway, Jonathan
Kirby, Christina
Shrestha, Om K.
Weihofen, Wilhelm
Fodor, Michelle
Xu, Mei
Chopra, Rajiv
Perry, Sarah L.
A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening
title A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening
title_full A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening
title_fullStr A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening
title_full_unstemmed A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening
title_short A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening
title_sort capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8366422/
https://www.ncbi.nlm.nih.gov/pubmed/34429718
http://dx.doi.org/10.1107/S1600576721004155
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