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Histogram clustering for rapid time-domain fluorescence lifetime image analysis
We propose a histogram clustering (HC) method to accelerate fluorescence lifetime imaging (FLIM) analysis in pixel-wise and global fitting modes. The proposed method’s principle was demonstrated, and the combinations of HC with traditional FLIM analysis were explained. We assessed HC methods with bo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Optical Society of America
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8367240/ https://www.ncbi.nlm.nih.gov/pubmed/34457415 http://dx.doi.org/10.1364/BOE.427532 |
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author | Li, Yahui Sapermsap, Natakorn Yu, Jun Tian, Jinshou Chen, Yu Day-Uei Li, David |
author_facet | Li, Yahui Sapermsap, Natakorn Yu, Jun Tian, Jinshou Chen, Yu Day-Uei Li, David |
author_sort | Li, Yahui |
collection | PubMed |
description | We propose a histogram clustering (HC) method to accelerate fluorescence lifetime imaging (FLIM) analysis in pixel-wise and global fitting modes. The proposed method’s principle was demonstrated, and the combinations of HC with traditional FLIM analysis were explained. We assessed HC methods with both simulated and experimental datasets. The results reveal that HC not only increases analysis speed (up to 106 times) but also enhances lifetime estimation accuracy. Fast lifetime analysis strategies were suggested with execution times around or below 30 μs per histograms on MATLAB R2016a, 64-bit with the Intel Celeron CPU (2950M @ 2GHz). |
format | Online Article Text |
id | pubmed-8367240 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Optical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-83672402021-08-26 Histogram clustering for rapid time-domain fluorescence lifetime image analysis Li, Yahui Sapermsap, Natakorn Yu, Jun Tian, Jinshou Chen, Yu Day-Uei Li, David Biomed Opt Express Article We propose a histogram clustering (HC) method to accelerate fluorescence lifetime imaging (FLIM) analysis in pixel-wise and global fitting modes. The proposed method’s principle was demonstrated, and the combinations of HC with traditional FLIM analysis were explained. We assessed HC methods with both simulated and experimental datasets. The results reveal that HC not only increases analysis speed (up to 106 times) but also enhances lifetime estimation accuracy. Fast lifetime analysis strategies were suggested with execution times around or below 30 μs per histograms on MATLAB R2016a, 64-bit with the Intel Celeron CPU (2950M @ 2GHz). Optical Society of America 2021-06-21 /pmc/articles/PMC8367240/ /pubmed/34457415 http://dx.doi.org/10.1364/BOE.427532 Text en Published by The Optical Society under the terms of the Creative Commons Attribution 4.0 License. Further distribution of this work must maintain attribution to the author(s) and the published article’s title, journal citation, and DOI. https://creativecommons.org/licenses/by/4.0/https://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Li, Yahui Sapermsap, Natakorn Yu, Jun Tian, Jinshou Chen, Yu Day-Uei Li, David Histogram clustering for rapid time-domain fluorescence lifetime image analysis |
title | Histogram clustering for rapid time-domain fluorescence lifetime image analysis |
title_full | Histogram clustering for rapid time-domain fluorescence lifetime image analysis |
title_fullStr | Histogram clustering for rapid time-domain fluorescence lifetime image analysis |
title_full_unstemmed | Histogram clustering for rapid time-domain fluorescence lifetime image analysis |
title_short | Histogram clustering for rapid time-domain fluorescence lifetime image analysis |
title_sort | histogram clustering for rapid time-domain fluorescence lifetime image analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8367240/ https://www.ncbi.nlm.nih.gov/pubmed/34457415 http://dx.doi.org/10.1364/BOE.427532 |
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