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Histogram clustering for rapid time-domain fluorescence lifetime image analysis

We propose a histogram clustering (HC) method to accelerate fluorescence lifetime imaging (FLIM) analysis in pixel-wise and global fitting modes. The proposed method’s principle was demonstrated, and the combinations of HC with traditional FLIM analysis were explained. We assessed HC methods with bo...

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Detalles Bibliográficos
Autores principales: Li, Yahui, Sapermsap, Natakorn, Yu, Jun, Tian, Jinshou, Chen, Yu, Day-Uei Li, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Optical Society of America 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8367240/
https://www.ncbi.nlm.nih.gov/pubmed/34457415
http://dx.doi.org/10.1364/BOE.427532
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author Li, Yahui
Sapermsap, Natakorn
Yu, Jun
Tian, Jinshou
Chen, Yu
Day-Uei Li, David
author_facet Li, Yahui
Sapermsap, Natakorn
Yu, Jun
Tian, Jinshou
Chen, Yu
Day-Uei Li, David
author_sort Li, Yahui
collection PubMed
description We propose a histogram clustering (HC) method to accelerate fluorescence lifetime imaging (FLIM) analysis in pixel-wise and global fitting modes. The proposed method’s principle was demonstrated, and the combinations of HC with traditional FLIM analysis were explained. We assessed HC methods with both simulated and experimental datasets. The results reveal that HC not only increases analysis speed (up to 106 times) but also enhances lifetime estimation accuracy. Fast lifetime analysis strategies were suggested with execution times around or below 30 μs per histograms on MATLAB R2016a, 64-bit with the Intel Celeron CPU (2950M @ 2GHz).
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spelling pubmed-83672402021-08-26 Histogram clustering for rapid time-domain fluorescence lifetime image analysis Li, Yahui Sapermsap, Natakorn Yu, Jun Tian, Jinshou Chen, Yu Day-Uei Li, David Biomed Opt Express Article We propose a histogram clustering (HC) method to accelerate fluorescence lifetime imaging (FLIM) analysis in pixel-wise and global fitting modes. The proposed method’s principle was demonstrated, and the combinations of HC with traditional FLIM analysis were explained. We assessed HC methods with both simulated and experimental datasets. The results reveal that HC not only increases analysis speed (up to 106 times) but also enhances lifetime estimation accuracy. Fast lifetime analysis strategies were suggested with execution times around or below 30 μs per histograms on MATLAB R2016a, 64-bit with the Intel Celeron CPU (2950M @ 2GHz). Optical Society of America 2021-06-21 /pmc/articles/PMC8367240/ /pubmed/34457415 http://dx.doi.org/10.1364/BOE.427532 Text en Published by The Optical Society under the terms of the Creative Commons Attribution 4.0 License. Further distribution of this work must maintain attribution to the author(s) and the published article’s title, journal citation, and DOI. https://creativecommons.org/licenses/by/4.0/https://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Li, Yahui
Sapermsap, Natakorn
Yu, Jun
Tian, Jinshou
Chen, Yu
Day-Uei Li, David
Histogram clustering for rapid time-domain fluorescence lifetime image analysis
title Histogram clustering for rapid time-domain fluorescence lifetime image analysis
title_full Histogram clustering for rapid time-domain fluorescence lifetime image analysis
title_fullStr Histogram clustering for rapid time-domain fluorescence lifetime image analysis
title_full_unstemmed Histogram clustering for rapid time-domain fluorescence lifetime image analysis
title_short Histogram clustering for rapid time-domain fluorescence lifetime image analysis
title_sort histogram clustering for rapid time-domain fluorescence lifetime image analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8367240/
https://www.ncbi.nlm.nih.gov/pubmed/34457415
http://dx.doi.org/10.1364/BOE.427532
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