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Histone Methyltransferases Useful in Gastric Cancer Research

Gastric cancer (GC) is one of the most frequent tumors in the world. Stomach adenocarcinoma is a heterogeneous tumor, turning the prognosis prediction and patients’ clinical management difficult. Some diagnosis tests for GC are been development using knowledge based in polymorphisms, somatic copy nu...

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Autores principales: Reyes, Dafne Alejandra, Sarría, Victor Manuel Saure, Salazar-Viedma, Marcela, D’Afonseca, Vívian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8369960/
https://www.ncbi.nlm.nih.gov/pubmed/34413625
http://dx.doi.org/10.1177/11769351211039862
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author Reyes, Dafne Alejandra
Sarría, Victor Manuel Saure
Salazar-Viedma, Marcela
D’Afonseca, Vívian
author_facet Reyes, Dafne Alejandra
Sarría, Victor Manuel Saure
Salazar-Viedma, Marcela
D’Afonseca, Vívian
author_sort Reyes, Dafne Alejandra
collection PubMed
description Gastric cancer (GC) is one of the most frequent tumors in the world. Stomach adenocarcinoma is a heterogeneous tumor, turning the prognosis prediction and patients’ clinical management difficult. Some diagnosis tests for GC are been development using knowledge based in polymorphisms, somatic copy number alteration (SCNA) and aberrant histone methylation. This last event, a posttranslational modification that occurs at the chromatin level, is an important epigenetic alteration seen in several tumors including stomach adenocarcinoma. Histone methyltransferases (HMT) are the proteins responsible for the methylation in specific amino acids residues of histones tails. Here, were presented several HMTs that could be relating to GC process. We use public data from 440 patients with stomach adenocarcinoma. We evaluated the alterations as SCNAs, mutations, and genes expression level of HMTs in these aforementioned samples. As results, it was identified the 10 HMTs most altered (up to 30%) in stomach adenocarcinoma samples, which are the PRDM14, PRDM9, SUV39H2, NSD2, SMYD5, SETDB1, PRDM12, SUV39H1, NSD3, and EHMT2 genes. The PRDM9 gene is among most mutated and amplified HMTs within the data set studied. PRDM14 is downregulated in 79% of the samples and the SUV39H2 gene is down expressed in patients with recurred/progressed disease. Several HMTs are altered in many cancers. It is important to generate a genetic atlas of alterations of cancer-related genes to improve the understanding of tumorigenesis events and to propose novel tools of diagnosis and prognosis for the cancer control.
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spelling pubmed-83699602021-08-18 Histone Methyltransferases Useful in Gastric Cancer Research Reyes, Dafne Alejandra Sarría, Victor Manuel Saure Salazar-Viedma, Marcela D’Afonseca, Vívian Cancer Inform Original Research Gastric cancer (GC) is one of the most frequent tumors in the world. Stomach adenocarcinoma is a heterogeneous tumor, turning the prognosis prediction and patients’ clinical management difficult. Some diagnosis tests for GC are been development using knowledge based in polymorphisms, somatic copy number alteration (SCNA) and aberrant histone methylation. This last event, a posttranslational modification that occurs at the chromatin level, is an important epigenetic alteration seen in several tumors including stomach adenocarcinoma. Histone methyltransferases (HMT) are the proteins responsible for the methylation in specific amino acids residues of histones tails. Here, were presented several HMTs that could be relating to GC process. We use public data from 440 patients with stomach adenocarcinoma. We evaluated the alterations as SCNAs, mutations, and genes expression level of HMTs in these aforementioned samples. As results, it was identified the 10 HMTs most altered (up to 30%) in stomach adenocarcinoma samples, which are the PRDM14, PRDM9, SUV39H2, NSD2, SMYD5, SETDB1, PRDM12, SUV39H1, NSD3, and EHMT2 genes. The PRDM9 gene is among most mutated and amplified HMTs within the data set studied. PRDM14 is downregulated in 79% of the samples and the SUV39H2 gene is down expressed in patients with recurred/progressed disease. Several HMTs are altered in many cancers. It is important to generate a genetic atlas of alterations of cancer-related genes to improve the understanding of tumorigenesis events and to propose novel tools of diagnosis and prognosis for the cancer control. SAGE Publications 2021-08-14 /pmc/articles/PMC8369960/ /pubmed/34413625 http://dx.doi.org/10.1177/11769351211039862 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research
Reyes, Dafne Alejandra
Sarría, Victor Manuel Saure
Salazar-Viedma, Marcela
D’Afonseca, Vívian
Histone Methyltransferases Useful in Gastric Cancer Research
title Histone Methyltransferases Useful in Gastric Cancer Research
title_full Histone Methyltransferases Useful in Gastric Cancer Research
title_fullStr Histone Methyltransferases Useful in Gastric Cancer Research
title_full_unstemmed Histone Methyltransferases Useful in Gastric Cancer Research
title_short Histone Methyltransferases Useful in Gastric Cancer Research
title_sort histone methyltransferases useful in gastric cancer research
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8369960/
https://www.ncbi.nlm.nih.gov/pubmed/34413625
http://dx.doi.org/10.1177/11769351211039862
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