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Histone Methyltransferases Useful in Gastric Cancer Research
Gastric cancer (GC) is one of the most frequent tumors in the world. Stomach adenocarcinoma is a heterogeneous tumor, turning the prognosis prediction and patients’ clinical management difficult. Some diagnosis tests for GC are been development using knowledge based in polymorphisms, somatic copy nu...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8369960/ https://www.ncbi.nlm.nih.gov/pubmed/34413625 http://dx.doi.org/10.1177/11769351211039862 |
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author | Reyes, Dafne Alejandra Sarría, Victor Manuel Saure Salazar-Viedma, Marcela D’Afonseca, Vívian |
author_facet | Reyes, Dafne Alejandra Sarría, Victor Manuel Saure Salazar-Viedma, Marcela D’Afonseca, Vívian |
author_sort | Reyes, Dafne Alejandra |
collection | PubMed |
description | Gastric cancer (GC) is one of the most frequent tumors in the world. Stomach adenocarcinoma is a heterogeneous tumor, turning the prognosis prediction and patients’ clinical management difficult. Some diagnosis tests for GC are been development using knowledge based in polymorphisms, somatic copy number alteration (SCNA) and aberrant histone methylation. This last event, a posttranslational modification that occurs at the chromatin level, is an important epigenetic alteration seen in several tumors including stomach adenocarcinoma. Histone methyltransferases (HMT) are the proteins responsible for the methylation in specific amino acids residues of histones tails. Here, were presented several HMTs that could be relating to GC process. We use public data from 440 patients with stomach adenocarcinoma. We evaluated the alterations as SCNAs, mutations, and genes expression level of HMTs in these aforementioned samples. As results, it was identified the 10 HMTs most altered (up to 30%) in stomach adenocarcinoma samples, which are the PRDM14, PRDM9, SUV39H2, NSD2, SMYD5, SETDB1, PRDM12, SUV39H1, NSD3, and EHMT2 genes. The PRDM9 gene is among most mutated and amplified HMTs within the data set studied. PRDM14 is downregulated in 79% of the samples and the SUV39H2 gene is down expressed in patients with recurred/progressed disease. Several HMTs are altered in many cancers. It is important to generate a genetic atlas of alterations of cancer-related genes to improve the understanding of tumorigenesis events and to propose novel tools of diagnosis and prognosis for the cancer control. |
format | Online Article Text |
id | pubmed-8369960 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-83699602021-08-18 Histone Methyltransferases Useful in Gastric Cancer Research Reyes, Dafne Alejandra Sarría, Victor Manuel Saure Salazar-Viedma, Marcela D’Afonseca, Vívian Cancer Inform Original Research Gastric cancer (GC) is one of the most frequent tumors in the world. Stomach adenocarcinoma is a heterogeneous tumor, turning the prognosis prediction and patients’ clinical management difficult. Some diagnosis tests for GC are been development using knowledge based in polymorphisms, somatic copy number alteration (SCNA) and aberrant histone methylation. This last event, a posttranslational modification that occurs at the chromatin level, is an important epigenetic alteration seen in several tumors including stomach adenocarcinoma. Histone methyltransferases (HMT) are the proteins responsible for the methylation in specific amino acids residues of histones tails. Here, were presented several HMTs that could be relating to GC process. We use public data from 440 patients with stomach adenocarcinoma. We evaluated the alterations as SCNAs, mutations, and genes expression level of HMTs in these aforementioned samples. As results, it was identified the 10 HMTs most altered (up to 30%) in stomach adenocarcinoma samples, which are the PRDM14, PRDM9, SUV39H2, NSD2, SMYD5, SETDB1, PRDM12, SUV39H1, NSD3, and EHMT2 genes. The PRDM9 gene is among most mutated and amplified HMTs within the data set studied. PRDM14 is downregulated in 79% of the samples and the SUV39H2 gene is down expressed in patients with recurred/progressed disease. Several HMTs are altered in many cancers. It is important to generate a genetic atlas of alterations of cancer-related genes to improve the understanding of tumorigenesis events and to propose novel tools of diagnosis and prognosis for the cancer control. SAGE Publications 2021-08-14 /pmc/articles/PMC8369960/ /pubmed/34413625 http://dx.doi.org/10.1177/11769351211039862 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Reyes, Dafne Alejandra Sarría, Victor Manuel Saure Salazar-Viedma, Marcela D’Afonseca, Vívian Histone Methyltransferases Useful in Gastric Cancer Research |
title | Histone Methyltransferases Useful in Gastric Cancer Research |
title_full | Histone Methyltransferases Useful in Gastric Cancer Research |
title_fullStr | Histone Methyltransferases Useful in Gastric Cancer Research |
title_full_unstemmed | Histone Methyltransferases Useful in Gastric Cancer Research |
title_short | Histone Methyltransferases Useful in Gastric Cancer Research |
title_sort | histone methyltransferases useful in gastric cancer research |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8369960/ https://www.ncbi.nlm.nih.gov/pubmed/34413625 http://dx.doi.org/10.1177/11769351211039862 |
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