Cargando…
ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
The tumor microenvironment (TME) plays an important role in the growth and invasion of glioma. This study aimed to analyze the composition of the immune microenvironment in glioma samples and analyze the important differentially expressed genes to identify novel immune-targeted therapy for glioma. W...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8371204/ https://www.ncbi.nlm.nih.gov/pubmed/34422796 http://dx.doi.org/10.3389/fcell.2021.659080 |
_version_ | 1783739592204091392 |
---|---|
author | Lin, Zhongxiao Wen, Min Yu, Enxing Lin, Xiao Wang, Hua Chen, Jiayu Yao, ChaoJie Zhang, Hengli Ru, Junnan Wang, Kankai Zhang, Ying Huang, Lijie Zhuge, Qichuan Yang, Su |
author_facet | Lin, Zhongxiao Wen, Min Yu, Enxing Lin, Xiao Wang, Hua Chen, Jiayu Yao, ChaoJie Zhang, Hengli Ru, Junnan Wang, Kankai Zhang, Ying Huang, Lijie Zhuge, Qichuan Yang, Su |
author_sort | Lin, Zhongxiao |
collection | PubMed |
description | The tumor microenvironment (TME) plays an important role in the growth and invasion of glioma. This study aimed to analyze the composition of the immune microenvironment in glioma samples and analyze the important differentially expressed genes to identify novel immune-targeted therapy for glioma. We downloaded transcriptomic data of 669 glioma samples from The Cancer Genome Atlas database. CIBERSORT and ESTIMATE methods were used to calculate the proportion of tumor-infiltrating immune cells and ratio of immune and stromal components in the TME. The differentially expressed genes (DEGs) were screened by comparing the genes expressed by both stromal and immune cells. Annexin A1 (ANXA1) was determined to be an important prognostic indicator through the common overlap of univariate Cox regression analysis and protein–protein interaction network analysis. The proportion of tumor-infiltrating immune cells, calculated by CIBERSORT algorithm, had a significant difference in distribution among the high and low ANXA1 expression groups, indicating that ANXA1 could be an important immune marker of TME. Furthermore, ANXA1 level was positively correlated with the histopathological factors and negatively related to the survival of glioma patients based on the analysis of multiple databases. Finally, in vitro experiments verified that antagonizing ANXA1 expression promoted cell apoptosis and inhibited the invasion and migration capacities of glioma cells. Therefore, ANXA1 due to its immune-related functions, can be an important prognostic indicator and immune microenvironmental marker for gliomas. Further studies are warranted to confirm ANXA1 as a potential immunotherapeutic target for gliomas. |
format | Online Article Text |
id | pubmed-8371204 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-83712042021-08-19 ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation Lin, Zhongxiao Wen, Min Yu, Enxing Lin, Xiao Wang, Hua Chen, Jiayu Yao, ChaoJie Zhang, Hengli Ru, Junnan Wang, Kankai Zhang, Ying Huang, Lijie Zhuge, Qichuan Yang, Su Front Cell Dev Biol Cell and Developmental Biology The tumor microenvironment (TME) plays an important role in the growth and invasion of glioma. This study aimed to analyze the composition of the immune microenvironment in glioma samples and analyze the important differentially expressed genes to identify novel immune-targeted therapy for glioma. We downloaded transcriptomic data of 669 glioma samples from The Cancer Genome Atlas database. CIBERSORT and ESTIMATE methods were used to calculate the proportion of tumor-infiltrating immune cells and ratio of immune and stromal components in the TME. The differentially expressed genes (DEGs) were screened by comparing the genes expressed by both stromal and immune cells. Annexin A1 (ANXA1) was determined to be an important prognostic indicator through the common overlap of univariate Cox regression analysis and protein–protein interaction network analysis. The proportion of tumor-infiltrating immune cells, calculated by CIBERSORT algorithm, had a significant difference in distribution among the high and low ANXA1 expression groups, indicating that ANXA1 could be an important immune marker of TME. Furthermore, ANXA1 level was positively correlated with the histopathological factors and negatively related to the survival of glioma patients based on the analysis of multiple databases. Finally, in vitro experiments verified that antagonizing ANXA1 expression promoted cell apoptosis and inhibited the invasion and migration capacities of glioma cells. Therefore, ANXA1 due to its immune-related functions, can be an important prognostic indicator and immune microenvironmental marker for gliomas. Further studies are warranted to confirm ANXA1 as a potential immunotherapeutic target for gliomas. Frontiers Media S.A. 2021-08-04 /pmc/articles/PMC8371204/ /pubmed/34422796 http://dx.doi.org/10.3389/fcell.2021.659080 Text en Copyright © 2021 Lin, Wen, Yu, Lin, Wang, Chen, Yao, Zhang, Ru, Wang, Zhang, Huang, Zhuge and Yang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cell and Developmental Biology Lin, Zhongxiao Wen, Min Yu, Enxing Lin, Xiao Wang, Hua Chen, Jiayu Yao, ChaoJie Zhang, Hengli Ru, Junnan Wang, Kankai Zhang, Ying Huang, Lijie Zhuge, Qichuan Yang, Su ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation |
title | ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation |
title_full | ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation |
title_fullStr | ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation |
title_full_unstemmed | ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation |
title_short | ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation |
title_sort | anxa1 as a prognostic and immune microenvironmental marker for gliomas based on transcriptomic analysis and experimental validation |
topic | Cell and Developmental Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8371204/ https://www.ncbi.nlm.nih.gov/pubmed/34422796 http://dx.doi.org/10.3389/fcell.2021.659080 |
work_keys_str_mv | AT linzhongxiao anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT wenmin anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT yuenxing anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT linxiao anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT wanghua anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT chenjiayu anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT yaochaojie anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT zhanghengli anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT rujunnan anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT wangkankai anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT zhangying anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT huanglijie anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT zhugeqichuan anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation AT yangsu anxa1asaprognosticandimmunemicroenvironmentalmarkerforgliomasbasedontranscriptomicanalysisandexperimentalvalidation |