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ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation

The tumor microenvironment (TME) plays an important role in the growth and invasion of glioma. This study aimed to analyze the composition of the immune microenvironment in glioma samples and analyze the important differentially expressed genes to identify novel immune-targeted therapy for glioma. W...

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Autores principales: Lin, Zhongxiao, Wen, Min, Yu, Enxing, Lin, Xiao, Wang, Hua, Chen, Jiayu, Yao, ChaoJie, Zhang, Hengli, Ru, Junnan, Wang, Kankai, Zhang, Ying, Huang, Lijie, Zhuge, Qichuan, Yang, Su
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8371204/
https://www.ncbi.nlm.nih.gov/pubmed/34422796
http://dx.doi.org/10.3389/fcell.2021.659080
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author Lin, Zhongxiao
Wen, Min
Yu, Enxing
Lin, Xiao
Wang, Hua
Chen, Jiayu
Yao, ChaoJie
Zhang, Hengli
Ru, Junnan
Wang, Kankai
Zhang, Ying
Huang, Lijie
Zhuge, Qichuan
Yang, Su
author_facet Lin, Zhongxiao
Wen, Min
Yu, Enxing
Lin, Xiao
Wang, Hua
Chen, Jiayu
Yao, ChaoJie
Zhang, Hengli
Ru, Junnan
Wang, Kankai
Zhang, Ying
Huang, Lijie
Zhuge, Qichuan
Yang, Su
author_sort Lin, Zhongxiao
collection PubMed
description The tumor microenvironment (TME) plays an important role in the growth and invasion of glioma. This study aimed to analyze the composition of the immune microenvironment in glioma samples and analyze the important differentially expressed genes to identify novel immune-targeted therapy for glioma. We downloaded transcriptomic data of 669 glioma samples from The Cancer Genome Atlas database. CIBERSORT and ESTIMATE methods were used to calculate the proportion of tumor-infiltrating immune cells and ratio of immune and stromal components in the TME. The differentially expressed genes (DEGs) were screened by comparing the genes expressed by both stromal and immune cells. Annexin A1 (ANXA1) was determined to be an important prognostic indicator through the common overlap of univariate Cox regression analysis and protein–protein interaction network analysis. The proportion of tumor-infiltrating immune cells, calculated by CIBERSORT algorithm, had a significant difference in distribution among the high and low ANXA1 expression groups, indicating that ANXA1 could be an important immune marker of TME. Furthermore, ANXA1 level was positively correlated with the histopathological factors and negatively related to the survival of glioma patients based on the analysis of multiple databases. Finally, in vitro experiments verified that antagonizing ANXA1 expression promoted cell apoptosis and inhibited the invasion and migration capacities of glioma cells. Therefore, ANXA1 due to its immune-related functions, can be an important prognostic indicator and immune microenvironmental marker for gliomas. Further studies are warranted to confirm ANXA1 as a potential immunotherapeutic target for gliomas.
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spelling pubmed-83712042021-08-19 ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation Lin, Zhongxiao Wen, Min Yu, Enxing Lin, Xiao Wang, Hua Chen, Jiayu Yao, ChaoJie Zhang, Hengli Ru, Junnan Wang, Kankai Zhang, Ying Huang, Lijie Zhuge, Qichuan Yang, Su Front Cell Dev Biol Cell and Developmental Biology The tumor microenvironment (TME) plays an important role in the growth and invasion of glioma. This study aimed to analyze the composition of the immune microenvironment in glioma samples and analyze the important differentially expressed genes to identify novel immune-targeted therapy for glioma. We downloaded transcriptomic data of 669 glioma samples from The Cancer Genome Atlas database. CIBERSORT and ESTIMATE methods were used to calculate the proportion of tumor-infiltrating immune cells and ratio of immune and stromal components in the TME. The differentially expressed genes (DEGs) were screened by comparing the genes expressed by both stromal and immune cells. Annexin A1 (ANXA1) was determined to be an important prognostic indicator through the common overlap of univariate Cox regression analysis and protein–protein interaction network analysis. The proportion of tumor-infiltrating immune cells, calculated by CIBERSORT algorithm, had a significant difference in distribution among the high and low ANXA1 expression groups, indicating that ANXA1 could be an important immune marker of TME. Furthermore, ANXA1 level was positively correlated with the histopathological factors and negatively related to the survival of glioma patients based on the analysis of multiple databases. Finally, in vitro experiments verified that antagonizing ANXA1 expression promoted cell apoptosis and inhibited the invasion and migration capacities of glioma cells. Therefore, ANXA1 due to its immune-related functions, can be an important prognostic indicator and immune microenvironmental marker for gliomas. Further studies are warranted to confirm ANXA1 as a potential immunotherapeutic target for gliomas. Frontiers Media S.A. 2021-08-04 /pmc/articles/PMC8371204/ /pubmed/34422796 http://dx.doi.org/10.3389/fcell.2021.659080 Text en Copyright © 2021 Lin, Wen, Yu, Lin, Wang, Chen, Yao, Zhang, Ru, Wang, Zhang, Huang, Zhuge and Yang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Lin, Zhongxiao
Wen, Min
Yu, Enxing
Lin, Xiao
Wang, Hua
Chen, Jiayu
Yao, ChaoJie
Zhang, Hengli
Ru, Junnan
Wang, Kankai
Zhang, Ying
Huang, Lijie
Zhuge, Qichuan
Yang, Su
ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
title ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
title_full ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
title_fullStr ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
title_full_unstemmed ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
title_short ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
title_sort anxa1 as a prognostic and immune microenvironmental marker for gliomas based on transcriptomic analysis and experimental validation
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8371204/
https://www.ncbi.nlm.nih.gov/pubmed/34422796
http://dx.doi.org/10.3389/fcell.2021.659080
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