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LAMB2 novel variant c.2885‐9 C>A affects RNA splicing in a minigene assay

BACKGROUND: Both Pierson syndrome (PS) and isolated nephrotic syndrome can be caused by LAMB2 biallelic pathogenic variants. Only 15 causative splicing variants in the LAMB2 gene have been reported. However, the pathogenicity of most of these variants has not been verified, which may lead to incorre...

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Autores principales: Wang, Xiaoyuan, Xiao, Huijie, Su, Baige, Ren, Yali, Ding, Jie, Wang, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8372075/
https://www.ncbi.nlm.nih.gov/pubmed/33982833
http://dx.doi.org/10.1002/mgg3.1704
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author Wang, Xiaoyuan
Xiao, Huijie
Su, Baige
Ren, Yali
Ding, Jie
Wang, Fang
author_facet Wang, Xiaoyuan
Xiao, Huijie
Su, Baige
Ren, Yali
Ding, Jie
Wang, Fang
author_sort Wang, Xiaoyuan
collection PubMed
description BACKGROUND: Both Pierson syndrome (PS) and isolated nephrotic syndrome can be caused by LAMB2 biallelic pathogenic variants. Only 15 causative splicing variants in the LAMB2 gene have been reported. However, the pathogenicity of most of these variants has not been verified, which may lead to incorrect interpretation of the functional consequence of these variants. METHODS: Using high‐throughput DNA sequencing and Sanger sequencing, we detected variants in a female with clinically suspected PS. A minigene splicing assay was performed to assess the effect of LAMB2 intron 20 c.2885‐9C>A on RNA splicing. We also performed the immunohistochemical analysis of laminin beta‐2 in kidney tissues. RESULTS: Two novel LAMB2 heteroallelic variants were found: a paternally inherited variant c.2885‐9C>A in intron 20 and a maternally inherited variant c. 3658C>T (p. (Gln1220Ter)). In vitro minigene assay showed that the variant c.2885‐9C>A caused erroneous integration of a 7 bp sequence into intron 20. Immunohistochemical analysis revealed the absence of glomerular expression of laminin beta‐2, the protein encoded by LAMB2. CONCLUSION: We demonstrated the impact of a novel LAMB2 intronic variant on RNA splicing using the minigene assay firstly. Our results extend the mutational spectrum of LAMB2.
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spelling pubmed-83720752021-08-23 LAMB2 novel variant c.2885‐9 C>A affects RNA splicing in a minigene assay Wang, Xiaoyuan Xiao, Huijie Su, Baige Ren, Yali Ding, Jie Wang, Fang Mol Genet Genomic Med Original Articles BACKGROUND: Both Pierson syndrome (PS) and isolated nephrotic syndrome can be caused by LAMB2 biallelic pathogenic variants. Only 15 causative splicing variants in the LAMB2 gene have been reported. However, the pathogenicity of most of these variants has not been verified, which may lead to incorrect interpretation of the functional consequence of these variants. METHODS: Using high‐throughput DNA sequencing and Sanger sequencing, we detected variants in a female with clinically suspected PS. A minigene splicing assay was performed to assess the effect of LAMB2 intron 20 c.2885‐9C>A on RNA splicing. We also performed the immunohistochemical analysis of laminin beta‐2 in kidney tissues. RESULTS: Two novel LAMB2 heteroallelic variants were found: a paternally inherited variant c.2885‐9C>A in intron 20 and a maternally inherited variant c. 3658C>T (p. (Gln1220Ter)). In vitro minigene assay showed that the variant c.2885‐9C>A caused erroneous integration of a 7 bp sequence into intron 20. Immunohistochemical analysis revealed the absence of glomerular expression of laminin beta‐2, the protein encoded by LAMB2. CONCLUSION: We demonstrated the impact of a novel LAMB2 intronic variant on RNA splicing using the minigene assay firstly. Our results extend the mutational spectrum of LAMB2. John Wiley and Sons Inc. 2021-05-13 /pmc/articles/PMC8372075/ /pubmed/33982833 http://dx.doi.org/10.1002/mgg3.1704 Text en © 2021 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Wang, Xiaoyuan
Xiao, Huijie
Su, Baige
Ren, Yali
Ding, Jie
Wang, Fang
LAMB2 novel variant c.2885‐9 C>A affects RNA splicing in a minigene assay
title LAMB2 novel variant c.2885‐9 C>A affects RNA splicing in a minigene assay
title_full LAMB2 novel variant c.2885‐9 C>A affects RNA splicing in a minigene assay
title_fullStr LAMB2 novel variant c.2885‐9 C>A affects RNA splicing in a minigene assay
title_full_unstemmed LAMB2 novel variant c.2885‐9 C>A affects RNA splicing in a minigene assay
title_short LAMB2 novel variant c.2885‐9 C>A affects RNA splicing in a minigene assay
title_sort lamb2 novel variant c.2885‐9 c>a affects rna splicing in a minigene assay
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8372075/
https://www.ncbi.nlm.nih.gov/pubmed/33982833
http://dx.doi.org/10.1002/mgg3.1704
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