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Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations

Sampling rare and clustered populations is challenging because of the effort required to find rare units. Heuristically, a practitioner would prefer to discontinue sampling in areas where rare units of interest are apparently extremely sparse or absent. We take advantage of the characteristics of in...

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Autores principales: Salehi, Mohammad, Smith, David R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8372892/
https://www.ncbi.nlm.nih.gov/pubmed/34407106
http://dx.doi.org/10.1371/journal.pone.0255256
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author Salehi, Mohammad
Smith, David R.
author_facet Salehi, Mohammad
Smith, David R.
author_sort Salehi, Mohammad
collection PubMed
description Sampling rare and clustered populations is challenging because of the effort required to find rare units. Heuristically, a practitioner would prefer to discontinue sampling in areas where rare units of interest are apparently extremely sparse or absent. We take advantage of the characteristics of inverse sampling to adaptively inform practitioners when it is efficient to move on to sample new areas. We introduce Adaptive Two-stage Inverse Sampling (ATIS), which is designed to leave a selected area after observation of an a priori number of only non-rare units and to continue sampling in the area when rare units are observed. ATIS is efficient in many cases and yields more rare units than conventional sampling for a rare and clustered population. We derive unbiased estimators of population total and variance. We also introduce an easy-to-compute estimator, which is nearly as efficient as the unbiased estimator. A simulation study on a rare plant population of buttercups (Ranunculus) shows that ATIS even with the easy-to-compute estimator is more efficient than its conventional sampling counterparts and is more efficient than Two-stage Adaptive Cluster Sampling (TACS) for small and moderate final sample sizes. Additional simulations reveal that ATIS is efficient for binary data (e.g., presence or absence) whereas TACS is inefficient for binary data. The overall results indicate that ATIS is consistently efficient compared to conventional sampling and to adaptive cluster sampling in some important cases.
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spelling pubmed-83728922021-08-19 Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations Salehi, Mohammad Smith, David R. PLoS One Research Article Sampling rare and clustered populations is challenging because of the effort required to find rare units. Heuristically, a practitioner would prefer to discontinue sampling in areas where rare units of interest are apparently extremely sparse or absent. We take advantage of the characteristics of inverse sampling to adaptively inform practitioners when it is efficient to move on to sample new areas. We introduce Adaptive Two-stage Inverse Sampling (ATIS), which is designed to leave a selected area after observation of an a priori number of only non-rare units and to continue sampling in the area when rare units are observed. ATIS is efficient in many cases and yields more rare units than conventional sampling for a rare and clustered population. We derive unbiased estimators of population total and variance. We also introduce an easy-to-compute estimator, which is nearly as efficient as the unbiased estimator. A simulation study on a rare plant population of buttercups (Ranunculus) shows that ATIS even with the easy-to-compute estimator is more efficient than its conventional sampling counterparts and is more efficient than Two-stage Adaptive Cluster Sampling (TACS) for small and moderate final sample sizes. Additional simulations reveal that ATIS is efficient for binary data (e.g., presence or absence) whereas TACS is inefficient for binary data. The overall results indicate that ATIS is consistently efficient compared to conventional sampling and to adaptive cluster sampling in some important cases. Public Library of Science 2021-08-18 /pmc/articles/PMC8372892/ /pubmed/34407106 http://dx.doi.org/10.1371/journal.pone.0255256 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Salehi, Mohammad
Smith, David R.
Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations
title Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations
title_full Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations
title_fullStr Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations
title_full_unstemmed Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations
title_short Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations
title_sort adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8372892/
https://www.ncbi.nlm.nih.gov/pubmed/34407106
http://dx.doi.org/10.1371/journal.pone.0255256
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