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Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics
Lifetimes of chemical species are typically estimated by either fitting time-correlated single-photon counting (TCSPC) histograms or phasor analysis from time-resolved photon arrivals. While both methods yield lifetimes in a computationally efficient manner, their performance is limited by choices m...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8373049/ https://www.ncbi.nlm.nih.gov/pubmed/34414380 http://dx.doi.org/10.1016/j.xcrp.2020.100234 |
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author | Tavakoli, Meysam Jazani, Sina Sgouralis, Ioannis Heo, Wooseok Ishii, Kunihiko Tahara, Tahei Pressé, Steve |
author_facet | Tavakoli, Meysam Jazani, Sina Sgouralis, Ioannis Heo, Wooseok Ishii, Kunihiko Tahara, Tahei Pressé, Steve |
author_sort | Tavakoli, Meysam |
collection | PubMed |
description | Lifetimes of chemical species are typically estimated by either fitting time-correlated single-photon counting (TCSPC) histograms or phasor analysis from time-resolved photon arrivals. While both methods yield lifetimes in a computationally efficient manner, their performance is limited by choices made on the number of distinct chemical species contributing photons. However, the number of species is encoded in the photon arrival times collected for each illuminated spot and need not be set by hand a priori. Here, we propose a direct photon-by-photon analysis of data drawn from pulsed excitation experiments to infer, simultaneously and self-consistently, the number of species and their associated lifetimes from a few thousand photons. We do so by leveraging new mathematical tools within the Bayesian nonparametric. We benchmark our method for both simulated and experimental data for 1–4 species. |
format | Online Article Text |
id | pubmed-8373049 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
record_format | MEDLINE/PubMed |
spelling | pubmed-83730492021-08-18 Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics Tavakoli, Meysam Jazani, Sina Sgouralis, Ioannis Heo, Wooseok Ishii, Kunihiko Tahara, Tahei Pressé, Steve Cell Rep Phys Sci Article Lifetimes of chemical species are typically estimated by either fitting time-correlated single-photon counting (TCSPC) histograms or phasor analysis from time-resolved photon arrivals. While both methods yield lifetimes in a computationally efficient manner, their performance is limited by choices made on the number of distinct chemical species contributing photons. However, the number of species is encoded in the photon arrival times collected for each illuminated spot and need not be set by hand a priori. Here, we propose a direct photon-by-photon analysis of data drawn from pulsed excitation experiments to infer, simultaneously and self-consistently, the number of species and their associated lifetimes from a few thousand photons. We do so by leveraging new mathematical tools within the Bayesian nonparametric. We benchmark our method for both simulated and experimental data for 1–4 species. 2020-10-14 2020-11-18 /pmc/articles/PMC8373049/ /pubmed/34414380 http://dx.doi.org/10.1016/j.xcrp.2020.100234 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | Article Tavakoli, Meysam Jazani, Sina Sgouralis, Ioannis Heo, Wooseok Ishii, Kunihiko Tahara, Tahei Pressé, Steve Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics |
title | Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics |
title_full | Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics |
title_fullStr | Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics |
title_full_unstemmed | Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics |
title_short | Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics |
title_sort | direct photon-by-photon analysis of time-resolved pulsed excitation data using bayesian nonparametrics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8373049/ https://www.ncbi.nlm.nih.gov/pubmed/34414380 http://dx.doi.org/10.1016/j.xcrp.2020.100234 |
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