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Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics

Lifetimes of chemical species are typically estimated by either fitting time-correlated single-photon counting (TCSPC) histograms or phasor analysis from time-resolved photon arrivals. While both methods yield lifetimes in a computationally efficient manner, their performance is limited by choices m...

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Autores principales: Tavakoli, Meysam, Jazani, Sina, Sgouralis, Ioannis, Heo, Wooseok, Ishii, Kunihiko, Tahara, Tahei, Pressé, Steve
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8373049/
https://www.ncbi.nlm.nih.gov/pubmed/34414380
http://dx.doi.org/10.1016/j.xcrp.2020.100234
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author Tavakoli, Meysam
Jazani, Sina
Sgouralis, Ioannis
Heo, Wooseok
Ishii, Kunihiko
Tahara, Tahei
Pressé, Steve
author_facet Tavakoli, Meysam
Jazani, Sina
Sgouralis, Ioannis
Heo, Wooseok
Ishii, Kunihiko
Tahara, Tahei
Pressé, Steve
author_sort Tavakoli, Meysam
collection PubMed
description Lifetimes of chemical species are typically estimated by either fitting time-correlated single-photon counting (TCSPC) histograms or phasor analysis from time-resolved photon arrivals. While both methods yield lifetimes in a computationally efficient manner, their performance is limited by choices made on the number of distinct chemical species contributing photons. However, the number of species is encoded in the photon arrival times collected for each illuminated spot and need not be set by hand a priori. Here, we propose a direct photon-by-photon analysis of data drawn from pulsed excitation experiments to infer, simultaneously and self-consistently, the number of species and their associated lifetimes from a few thousand photons. We do so by leveraging new mathematical tools within the Bayesian nonparametric. We benchmark our method for both simulated and experimental data for 1–4 species.
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spelling pubmed-83730492021-08-18 Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics Tavakoli, Meysam Jazani, Sina Sgouralis, Ioannis Heo, Wooseok Ishii, Kunihiko Tahara, Tahei Pressé, Steve Cell Rep Phys Sci Article Lifetimes of chemical species are typically estimated by either fitting time-correlated single-photon counting (TCSPC) histograms or phasor analysis from time-resolved photon arrivals. While both methods yield lifetimes in a computationally efficient manner, their performance is limited by choices made on the number of distinct chemical species contributing photons. However, the number of species is encoded in the photon arrival times collected for each illuminated spot and need not be set by hand a priori. Here, we propose a direct photon-by-photon analysis of data drawn from pulsed excitation experiments to infer, simultaneously and self-consistently, the number of species and their associated lifetimes from a few thousand photons. We do so by leveraging new mathematical tools within the Bayesian nonparametric. We benchmark our method for both simulated and experimental data for 1–4 species. 2020-10-14 2020-11-18 /pmc/articles/PMC8373049/ /pubmed/34414380 http://dx.doi.org/10.1016/j.xcrp.2020.100234 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Tavakoli, Meysam
Jazani, Sina
Sgouralis, Ioannis
Heo, Wooseok
Ishii, Kunihiko
Tahara, Tahei
Pressé, Steve
Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics
title Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics
title_full Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics
title_fullStr Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics
title_full_unstemmed Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics
title_short Direct Photon-by-Photon Analysis of Time-Resolved Pulsed Excitation Data using Bayesian Nonparametrics
title_sort direct photon-by-photon analysis of time-resolved pulsed excitation data using bayesian nonparametrics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8373049/
https://www.ncbi.nlm.nih.gov/pubmed/34414380
http://dx.doi.org/10.1016/j.xcrp.2020.100234
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