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Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications

Genetically Modified (GM) foods are becoming the future of agriculture on surviving global natural disasters and climate change by their enhanced production efficiency and improved functional properties. On the other hand, their adverse health and environmental effects, ample evidence on transgene l...

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Autores principales: Kaymaz, Sümeyra Vural, Elitas, Meltem
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8374247/
https://www.ncbi.nlm.nih.gov/pubmed/34434802
http://dx.doi.org/10.1016/j.mex.2021.101282
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author Kaymaz, Sümeyra Vural
Elitas, Meltem
author_facet Kaymaz, Sümeyra Vural
Elitas, Meltem
author_sort Kaymaz, Sümeyra Vural
collection PubMed
description Genetically Modified (GM) foods are becoming the future of agriculture on surviving global natural disasters and climate change by their enhanced production efficiency and improved functional properties. On the other hand, their adverse health and environmental effects, ample evidence on transgene leakage of Genetically Modified Organisms (GMOs) to crops have raised questions on their benefits and risks. Consequently, low-cost, reliable, rapid, and practical detection of GMOs have been important. GMO-detection platforms should be capable of stably storing detection reagents for long-delivery distances with varying ambient temperatures. In this study, we developed an event-specific, closed tube colorimetric GMO detection method based on Loop-Mediated Isothermal Amplification (LAMP) technique which can be integrated into GMO-detection platforms. The entire detection process optimized to 30 min and isothermally at 65 °C. The durability of the LAMP mixture in the test tubes showed that the LAMP reaction mixture, in which Bst • Simple, stable, and cheap storage method of LAMP reaction mixture for GMO-detection technologies. • GMO-detection platforms can stably store detection reagents for long-delivery distances with varying ambient temperatures. • Any DNA sample can be used in the field or resource-limited setting by untrained personnel.
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spelling pubmed-83742472021-08-24 Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications Kaymaz, Sümeyra Vural Elitas, Meltem MethodsX Method Article Genetically Modified (GM) foods are becoming the future of agriculture on surviving global natural disasters and climate change by their enhanced production efficiency and improved functional properties. On the other hand, their adverse health and environmental effects, ample evidence on transgene leakage of Genetically Modified Organisms (GMOs) to crops have raised questions on their benefits and risks. Consequently, low-cost, reliable, rapid, and practical detection of GMOs have been important. GMO-detection platforms should be capable of stably storing detection reagents for long-delivery distances with varying ambient temperatures. In this study, we developed an event-specific, closed tube colorimetric GMO detection method based on Loop-Mediated Isothermal Amplification (LAMP) technique which can be integrated into GMO-detection platforms. The entire detection process optimized to 30 min and isothermally at 65 °C. The durability of the LAMP mixture in the test tubes showed that the LAMP reaction mixture, in which Bst • Simple, stable, and cheap storage method of LAMP reaction mixture for GMO-detection technologies. • GMO-detection platforms can stably store detection reagents for long-delivery distances with varying ambient temperatures. • Any DNA sample can be used in the field or resource-limited setting by untrained personnel. Elsevier 2021-02-19 /pmc/articles/PMC8374247/ /pubmed/34434802 http://dx.doi.org/10.1016/j.mex.2021.101282 Text en © 2021 The Author(s). Published by Elsevier B.V. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Method Article
Kaymaz, Sümeyra Vural
Elitas, Meltem
Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications
title Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications
title_full Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications
title_fullStr Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications
title_full_unstemmed Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications
title_short Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications
title_sort optimization of loop-mediated isothermal amplification (lamp) reaction mixture for biosensor applications
topic Method Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8374247/
https://www.ncbi.nlm.nih.gov/pubmed/34434802
http://dx.doi.org/10.1016/j.mex.2021.101282
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