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VariantStore: an index for large-scale genomic variant search

Efficiently scaling genomic variant search indexes to thousands of samples is computationally challenging due to the presence of multiple coordinate systems to avoid reference biases. We present VariantStore, a system that indexes genomic variants from multiple samples using a variation graph and en...

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Detalles Bibliográficos
Autores principales:	Pandey, Prashant, Gao, Yinjie, Kingsford, Carl
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Method
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8375130/ https://www.ncbi.nlm.nih.gov/pubmed/34412679 http://dx.doi.org/10.1186/s13059-021-02442-8

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