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Comprehensive Bioinformatics Analysis Identifies POLR2I as a Key Gene in the Pathogenesis of Hypertensive Nephropathy

Hypertensive nephropathy (HN), mainly caused by chronic hypertension, is one of the major causes of end-stage renal disease. However, the pathogenesis of HN remains unclarified, and there is an urgent need for improved treatments. Gene expression profiles for HN and normal tissue were obtained from...

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Autores principales: You, Shilong, Xu, Jiaqi, Wu, Boquan, Wu, Shaojun, Zhang, Ying, Sun, Yingxian, Zhang, Naijin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8375388/
https://www.ncbi.nlm.nih.gov/pubmed/34422001
http://dx.doi.org/10.3389/fgene.2021.698570
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author You, Shilong
Xu, Jiaqi
Wu, Boquan
Wu, Shaojun
Zhang, Ying
Sun, Yingxian
Zhang, Naijin
author_facet You, Shilong
Xu, Jiaqi
Wu, Boquan
Wu, Shaojun
Zhang, Ying
Sun, Yingxian
Zhang, Naijin
author_sort You, Shilong
collection PubMed
description Hypertensive nephropathy (HN), mainly caused by chronic hypertension, is one of the major causes of end-stage renal disease. However, the pathogenesis of HN remains unclarified, and there is an urgent need for improved treatments. Gene expression profiles for HN and normal tissue were obtained from the Gene Expression Omnibus database. A total of 229 differentially co-expressed genes were identified by weighted gene co-expression network analysis and differential gene expression analysis. These genes were used to construct protein–protein interaction networks to search for hub genes. Following validation in an independent external dataset and in a clinical database, POLR2I, one of the hub genes, was identified as a key gene related to the pathogenesis of HN. The expression level of POLR2I is upregulated in HN, and the up-regulation of POLR2I is positively correlated with renal function in HN. Finally, we verified the protein levels of POLR2I in vivo to confirm the accuracy of our analysis. In conclusion, our study identified POLR2I as a key gene related to the pathogenesis of HN, providing new insights into the molecular mechanisms underlying HN.
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spelling pubmed-83753882021-08-20 Comprehensive Bioinformatics Analysis Identifies POLR2I as a Key Gene in the Pathogenesis of Hypertensive Nephropathy You, Shilong Xu, Jiaqi Wu, Boquan Wu, Shaojun Zhang, Ying Sun, Yingxian Zhang, Naijin Front Genet Genetics Hypertensive nephropathy (HN), mainly caused by chronic hypertension, is one of the major causes of end-stage renal disease. However, the pathogenesis of HN remains unclarified, and there is an urgent need for improved treatments. Gene expression profiles for HN and normal tissue were obtained from the Gene Expression Omnibus database. A total of 229 differentially co-expressed genes were identified by weighted gene co-expression network analysis and differential gene expression analysis. These genes were used to construct protein–protein interaction networks to search for hub genes. Following validation in an independent external dataset and in a clinical database, POLR2I, one of the hub genes, was identified as a key gene related to the pathogenesis of HN. The expression level of POLR2I is upregulated in HN, and the up-regulation of POLR2I is positively correlated with renal function in HN. Finally, we verified the protein levels of POLR2I in vivo to confirm the accuracy of our analysis. In conclusion, our study identified POLR2I as a key gene related to the pathogenesis of HN, providing new insights into the molecular mechanisms underlying HN. Frontiers Media S.A. 2021-08-05 /pmc/articles/PMC8375388/ /pubmed/34422001 http://dx.doi.org/10.3389/fgene.2021.698570 Text en Copyright © 2021 You, Xu, Wu, Wu, Zhang, Sun and Zhang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
You, Shilong
Xu, Jiaqi
Wu, Boquan
Wu, Shaojun
Zhang, Ying
Sun, Yingxian
Zhang, Naijin
Comprehensive Bioinformatics Analysis Identifies POLR2I as a Key Gene in the Pathogenesis of Hypertensive Nephropathy
title Comprehensive Bioinformatics Analysis Identifies POLR2I as a Key Gene in the Pathogenesis of Hypertensive Nephropathy
title_full Comprehensive Bioinformatics Analysis Identifies POLR2I as a Key Gene in the Pathogenesis of Hypertensive Nephropathy
title_fullStr Comprehensive Bioinformatics Analysis Identifies POLR2I as a Key Gene in the Pathogenesis of Hypertensive Nephropathy
title_full_unstemmed Comprehensive Bioinformatics Analysis Identifies POLR2I as a Key Gene in the Pathogenesis of Hypertensive Nephropathy
title_short Comprehensive Bioinformatics Analysis Identifies POLR2I as a Key Gene in the Pathogenesis of Hypertensive Nephropathy
title_sort comprehensive bioinformatics analysis identifies polr2i as a key gene in the pathogenesis of hypertensive nephropathy
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8375388/
https://www.ncbi.nlm.nih.gov/pubmed/34422001
http://dx.doi.org/10.3389/fgene.2021.698570
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