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Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study
The COVID-19 pandemic has created an urgent need for robust, scalable monitoring tools supporting stratification of high-risk patients. This research aims to develop and validate prediction models, using the UK Biobank, to estimate COVID-19 mortality risk in confirmed cases. From the 11,245 particip...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8376891/ https://www.ncbi.nlm.nih.gov/pubmed/34413324 http://dx.doi.org/10.1038/s41598-021-95136-x |
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author | Dabbah, Mohammad A. Reed, Angus B. Booth, Adam T. C. Yassaee, Arrash Despotovic, Aleksa Klasmer, Benjamin Binning, Emily Aral, Mert Plans, David Morelli, Davide Labrique, Alain B. Mohan, Diwakar |
author_facet | Dabbah, Mohammad A. Reed, Angus B. Booth, Adam T. C. Yassaee, Arrash Despotovic, Aleksa Klasmer, Benjamin Binning, Emily Aral, Mert Plans, David Morelli, Davide Labrique, Alain B. Mohan, Diwakar |
author_sort | Dabbah, Mohammad A. |
collection | PubMed |
description | The COVID-19 pandemic has created an urgent need for robust, scalable monitoring tools supporting stratification of high-risk patients. This research aims to develop and validate prediction models, using the UK Biobank, to estimate COVID-19 mortality risk in confirmed cases. From the 11,245 participants testing positive for COVID-19, we develop a data-driven random forest classification model with excellent performance (AUC: 0.91), using baseline characteristics, pre-existing conditions, symptoms, and vital signs, such that the score could dynamically assess mortality risk with disease deterioration. We also identify several significant novel predictors of COVID-19 mortality with equivalent or greater predictive value than established high-risk comorbidities, such as detailed anthropometrics and prior acute kidney failure, urinary tract infection, and pneumonias. The model design and feature selection enables utility in outpatient settings. Possible applications include supporting individual-level risk profiling and monitoring disease progression across patients with COVID-19 at-scale, especially in hospital-at-home settings. |
format | Online Article Text |
id | pubmed-8376891 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-83768912021-08-20 Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study Dabbah, Mohammad A. Reed, Angus B. Booth, Adam T. C. Yassaee, Arrash Despotovic, Aleksa Klasmer, Benjamin Binning, Emily Aral, Mert Plans, David Morelli, Davide Labrique, Alain B. Mohan, Diwakar Sci Rep Article The COVID-19 pandemic has created an urgent need for robust, scalable monitoring tools supporting stratification of high-risk patients. This research aims to develop and validate prediction models, using the UK Biobank, to estimate COVID-19 mortality risk in confirmed cases. From the 11,245 participants testing positive for COVID-19, we develop a data-driven random forest classification model with excellent performance (AUC: 0.91), using baseline characteristics, pre-existing conditions, symptoms, and vital signs, such that the score could dynamically assess mortality risk with disease deterioration. We also identify several significant novel predictors of COVID-19 mortality with equivalent or greater predictive value than established high-risk comorbidities, such as detailed anthropometrics and prior acute kidney failure, urinary tract infection, and pneumonias. The model design and feature selection enables utility in outpatient settings. Possible applications include supporting individual-level risk profiling and monitoring disease progression across patients with COVID-19 at-scale, especially in hospital-at-home settings. Nature Publishing Group UK 2021-08-19 /pmc/articles/PMC8376891/ /pubmed/34413324 http://dx.doi.org/10.1038/s41598-021-95136-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Dabbah, Mohammad A. Reed, Angus B. Booth, Adam T. C. Yassaee, Arrash Despotovic, Aleksa Klasmer, Benjamin Binning, Emily Aral, Mert Plans, David Morelli, Davide Labrique, Alain B. Mohan, Diwakar Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study |
title | Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study |
title_full | Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study |
title_fullStr | Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study |
title_full_unstemmed | Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study |
title_short | Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study |
title_sort | machine learning approach to dynamic risk modeling of mortality in covid-19: a uk biobank study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8376891/ https://www.ncbi.nlm.nih.gov/pubmed/34413324 http://dx.doi.org/10.1038/s41598-021-95136-x |
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