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An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm

Sepsis is a life-threatening condition and understanding the disease pathophysiology through the use of host immune response biomarkers is critical for patient stratification. Lack of accurate sepsis endotyping impedes clinicians from making timely decisions alongside insufficiencies in appropriate...

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Autores principales: Sardesai, Abha Umesh, Tanak, Ambalika Sanjeev, Krishnan, Subramaniam, Striegel, Deborah A., Schully, Kevin L., Clark, Danielle V., Muthukumar, Sriram, Prasad, Shalini
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8377018/
https://www.ncbi.nlm.nih.gov/pubmed/34413363
http://dx.doi.org/10.1038/s41598-021-96081-5
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author Sardesai, Abha Umesh
Tanak, Ambalika Sanjeev
Krishnan, Subramaniam
Striegel, Deborah A.
Schully, Kevin L.
Clark, Danielle V.
Muthukumar, Sriram
Prasad, Shalini
author_facet Sardesai, Abha Umesh
Tanak, Ambalika Sanjeev
Krishnan, Subramaniam
Striegel, Deborah A.
Schully, Kevin L.
Clark, Danielle V.
Muthukumar, Sriram
Prasad, Shalini
author_sort Sardesai, Abha Umesh
collection PubMed
description Sepsis is a life-threatening condition and understanding the disease pathophysiology through the use of host immune response biomarkers is critical for patient stratification. Lack of accurate sepsis endotyping impedes clinicians from making timely decisions alongside insufficiencies in appropriate sepsis management. This work aims to demonstrate the potential feasibility of a data-driven validation model for supporting clinical decisions to predict sepsis host-immune response. Herein, we used a machine learning approach to determine the predictive potential of identifying sepsis host immune response for patient stratification by combining multiple biomarker measurements from a single plasma sample. Results were obtained using the following cytokines and chemokines IL-6, IL-8, IL-10, IP-10 and TRAIL where the test dataset was 70%. Supervised machine learning algorithm naïve Bayes and decision tree algorithm showed good accuracy of 96.64% and 94.64%. These promising findings indicate the proposed AI approach could be a valuable testing resource for promoting clinical decision making.
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spelling pubmed-83770182021-08-27 An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm Sardesai, Abha Umesh Tanak, Ambalika Sanjeev Krishnan, Subramaniam Striegel, Deborah A. Schully, Kevin L. Clark, Danielle V. Muthukumar, Sriram Prasad, Shalini Sci Rep Article Sepsis is a life-threatening condition and understanding the disease pathophysiology through the use of host immune response biomarkers is critical for patient stratification. Lack of accurate sepsis endotyping impedes clinicians from making timely decisions alongside insufficiencies in appropriate sepsis management. This work aims to demonstrate the potential feasibility of a data-driven validation model for supporting clinical decisions to predict sepsis host-immune response. Herein, we used a machine learning approach to determine the predictive potential of identifying sepsis host immune response for patient stratification by combining multiple biomarker measurements from a single plasma sample. Results were obtained using the following cytokines and chemokines IL-6, IL-8, IL-10, IP-10 and TRAIL where the test dataset was 70%. Supervised machine learning algorithm naïve Bayes and decision tree algorithm showed good accuracy of 96.64% and 94.64%. These promising findings indicate the proposed AI approach could be a valuable testing resource for promoting clinical decision making. Nature Publishing Group UK 2021-08-19 /pmc/articles/PMC8377018/ /pubmed/34413363 http://dx.doi.org/10.1038/s41598-021-96081-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Sardesai, Abha Umesh
Tanak, Ambalika Sanjeev
Krishnan, Subramaniam
Striegel, Deborah A.
Schully, Kevin L.
Clark, Danielle V.
Muthukumar, Sriram
Prasad, Shalini
An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm
title An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm
title_full An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm
title_fullStr An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm
title_full_unstemmed An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm
title_short An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm
title_sort approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8377018/
https://www.ncbi.nlm.nih.gov/pubmed/34413363
http://dx.doi.org/10.1038/s41598-021-96081-5
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