Cargando…
Evaluating the Arrhenius equation for developmental processes
The famous Arrhenius equation is well suited to describing the temperature dependence of chemical reactions but has also been used for complicated biological processes. Here, we evaluate how well the simple Arrhenius equation predicts complex multi‐step biological processes, using frog and fruit fly...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8377445/ https://www.ncbi.nlm.nih.gov/pubmed/34414660 http://dx.doi.org/10.15252/msb.20209895 |
_version_ | 1783740660752318464 |
---|---|
author | Crapse, Joseph Pappireddi, Nishant Gupta, Meera Shvartsman, Stanislav Y Wieschaus, Eric Wühr, Martin |
author_facet | Crapse, Joseph Pappireddi, Nishant Gupta, Meera Shvartsman, Stanislav Y Wieschaus, Eric Wühr, Martin |
author_sort | Crapse, Joseph |
collection | PubMed |
description | The famous Arrhenius equation is well suited to describing the temperature dependence of chemical reactions but has also been used for complicated biological processes. Here, we evaluate how well the simple Arrhenius equation predicts complex multi‐step biological processes, using frog and fruit fly embryogenesis as two canonical models. We find that the Arrhenius equation provides a good approximation for the temperature dependence of embryogenesis, even though individual developmental intervals scale differently with temperature. At low and high temperatures, however, we observed significant departures from idealized Arrhenius Law behavior. When we model multi‐step reactions of idealized chemical networks, we are unable to generate comparable deviations from linearity. In contrast, we find the two enzymes GAPDH and β‐galactosidase show non‐linearity in the Arrhenius plot similar to our observations of embryonic development. Thus, we find that complex embryonic development can be well approximated by the simple Arrhenius equation regardless of non‐uniform developmental scaling and propose that the observed departure from this law likely results more from non‐idealized individual steps rather than from the complexity of the system. |
format | Online Article Text |
id | pubmed-8377445 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-83774452021-08-27 Evaluating the Arrhenius equation for developmental processes Crapse, Joseph Pappireddi, Nishant Gupta, Meera Shvartsman, Stanislav Y Wieschaus, Eric Wühr, Martin Mol Syst Biol Reports The famous Arrhenius equation is well suited to describing the temperature dependence of chemical reactions but has also been used for complicated biological processes. Here, we evaluate how well the simple Arrhenius equation predicts complex multi‐step biological processes, using frog and fruit fly embryogenesis as two canonical models. We find that the Arrhenius equation provides a good approximation for the temperature dependence of embryogenesis, even though individual developmental intervals scale differently with temperature. At low and high temperatures, however, we observed significant departures from idealized Arrhenius Law behavior. When we model multi‐step reactions of idealized chemical networks, we are unable to generate comparable deviations from linearity. In contrast, we find the two enzymes GAPDH and β‐galactosidase show non‐linearity in the Arrhenius plot similar to our observations of embryonic development. Thus, we find that complex embryonic development can be well approximated by the simple Arrhenius equation regardless of non‐uniform developmental scaling and propose that the observed departure from this law likely results more from non‐idealized individual steps rather than from the complexity of the system. John Wiley and Sons Inc. 2021-08-20 /pmc/articles/PMC8377445/ /pubmed/34414660 http://dx.doi.org/10.15252/msb.20209895 Text en © 2021 The Authors. Published under the terms of the CC BY 4.0 license https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Reports Crapse, Joseph Pappireddi, Nishant Gupta, Meera Shvartsman, Stanislav Y Wieschaus, Eric Wühr, Martin Evaluating the Arrhenius equation for developmental processes |
title | Evaluating the Arrhenius equation for developmental processes |
title_full | Evaluating the Arrhenius equation for developmental processes |
title_fullStr | Evaluating the Arrhenius equation for developmental processes |
title_full_unstemmed | Evaluating the Arrhenius equation for developmental processes |
title_short | Evaluating the Arrhenius equation for developmental processes |
title_sort | evaluating the arrhenius equation for developmental processes |
topic | Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8377445/ https://www.ncbi.nlm.nih.gov/pubmed/34414660 http://dx.doi.org/10.15252/msb.20209895 |
work_keys_str_mv | AT crapsejoseph evaluatingthearrheniusequationfordevelopmentalprocesses AT pappireddinishant evaluatingthearrheniusequationfordevelopmentalprocesses AT guptameera evaluatingthearrheniusequationfordevelopmentalprocesses AT shvartsmanstanislavy evaluatingthearrheniusequationfordevelopmentalprocesses AT wieschauseric evaluatingthearrheniusequationfordevelopmentalprocesses AT wuhrmartin evaluatingthearrheniusequationfordevelopmentalprocesses |