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RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae
Tea Mosquito Bug (TMB), Helopeltis bradyi (Hemiptera: Miridae) is one of the major pest infesting tea and cocoa plantations worldwide. Developing olfaction-based control methods was urges as an alternative to commonly used but non-environmental friendly chemical pesticides. However, the molecular me...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8377556/ https://www.ncbi.nlm.nih.gov/pubmed/34458528 http://dx.doi.org/10.1016/j.dib.2021.107302 |
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author | Soffan, Alan Subandiyah, Siti Wijonarko, Arman Sawitri, Widhi Dyah |
author_facet | Soffan, Alan Subandiyah, Siti Wijonarko, Arman Sawitri, Widhi Dyah |
author_sort | Soffan, Alan |
collection | PubMed |
description | Tea Mosquito Bug (TMB), Helopeltis bradyi (Hemiptera: Miridae) is one of the major pest infesting tea and cocoa plantations worldwide. Developing olfaction-based control methods was urges as an alternative to commonly used but non-environmental friendly chemical pesticides. However, the molecular mechanisms underlying TMB reception mechanism are still lacking. Here, we collected a pooled male and female TMB antennae for RNA extraction followed by sequencing using the BGISEQ-500 platform and de novo assembly. TMB antennae RNA-seq data yielded 32,142 unigenes with N50 and GC (%) were 2322 and 40.25; subsequently. The RNA-seq data are available in GenBank Sequence Read Archive (SRA) database with accession number SRR13327229. De novo transcriptome analysis had identified several genes involved in TMB odorant reception includes; 39 OBPs (odorant binding proteins), 10 CSPs (chemosensory proteins), 81 Ors (odorant receptors), 1 Orcos (co-receptors), 9 SNMPs (sensory neuron membrane proteins), 3 GRs (gustatory receptors) and 4 IRs (ionotropic receptors). Our study presents the first RNA seq for TMB antennae, which serve the primary molecular resources data, which will facilitate further research to develop olfaction-based control methods, potentially contribute to TMB management strategies. |
format | Online Article Text |
id | pubmed-8377556 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-83775562021-08-26 RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae Soffan, Alan Subandiyah, Siti Wijonarko, Arman Sawitri, Widhi Dyah Data Brief Data Article Tea Mosquito Bug (TMB), Helopeltis bradyi (Hemiptera: Miridae) is one of the major pest infesting tea and cocoa plantations worldwide. Developing olfaction-based control methods was urges as an alternative to commonly used but non-environmental friendly chemical pesticides. However, the molecular mechanisms underlying TMB reception mechanism are still lacking. Here, we collected a pooled male and female TMB antennae for RNA extraction followed by sequencing using the BGISEQ-500 platform and de novo assembly. TMB antennae RNA-seq data yielded 32,142 unigenes with N50 and GC (%) were 2322 and 40.25; subsequently. The RNA-seq data are available in GenBank Sequence Read Archive (SRA) database with accession number SRR13327229. De novo transcriptome analysis had identified several genes involved in TMB odorant reception includes; 39 OBPs (odorant binding proteins), 10 CSPs (chemosensory proteins), 81 Ors (odorant receptors), 1 Orcos (co-receptors), 9 SNMPs (sensory neuron membrane proteins), 3 GRs (gustatory receptors) and 4 IRs (ionotropic receptors). Our study presents the first RNA seq for TMB antennae, which serve the primary molecular resources data, which will facilitate further research to develop olfaction-based control methods, potentially contribute to TMB management strategies. Elsevier 2021-08-16 /pmc/articles/PMC8377556/ /pubmed/34458528 http://dx.doi.org/10.1016/j.dib.2021.107302 Text en © 2021 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Data Article Soffan, Alan Subandiyah, Siti Wijonarko, Arman Sawitri, Widhi Dyah RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae |
title | RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae |
title_full | RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae |
title_fullStr | RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae |
title_full_unstemmed | RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae |
title_short | RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae |
title_sort | rna-seq data of tea mosquito bugs, helopeltis bradyi, antennae |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8377556/ https://www.ncbi.nlm.nih.gov/pubmed/34458528 http://dx.doi.org/10.1016/j.dib.2021.107302 |
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