CeTF: an R/Bioconductor package for transcription factor co-expression networks using regulatory impact factors (RIF) and partial correlation and information (PCIT) analysis

BACKGROUND: Finding meaningful gene-gene interaction and the main Transcription Factors (TFs) in co-expression networks is one of the most important challenges in gene expression data mining. RESULTS: Here, we developed the R package “CeTF” that integrates the Partial Correlation with Information Th...

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Detalles Bibliográficos
Autores principales: Oliveira de Biagi, Carlos Alberto, Nociti, Ricardo Perecin, Brotto, Danielle Barbosa, Funicheli, Breno Osvaldo, Cássia Ruy, Patrícia de, Bianchi Ximenez, João Paulo, Alves Figueiredo, David Livingstone, Araújo Silva, Wilson
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8379792/
https://www.ncbi.nlm.nih.gov/pubmed/34416858
http://dx.doi.org/10.1186/s12864-021-07918-2

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