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Desulfovibrio is not always associated with adverse health effects in the Guangdong Gut Microbiome Project
Desulfovibrio (DSV) is frequently found in the human intestine but limited knowledge is available regarding the relationship between DSV and host health. In this study, we analyzed large-scale cohort data from the Guangdong Gut Microbiome Project to study the ecology of DSV and the associations of D...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8380029/ https://www.ncbi.nlm.nih.gov/pubmed/34466295 http://dx.doi.org/10.7717/peerj.12033 |
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author | Chen, Yi-ran Jing, Qin-long Chen, Fang-lan Zheng, Huimin Chen, Li-dan Yang, Zhi-cong |
author_facet | Chen, Yi-ran Jing, Qin-long Chen, Fang-lan Zheng, Huimin Chen, Li-dan Yang, Zhi-cong |
author_sort | Chen, Yi-ran |
collection | PubMed |
description | Desulfovibrio (DSV) is frequently found in the human intestine but limited knowledge is available regarding the relationship between DSV and host health. In this study, we analyzed large-scale cohort data from the Guangdong Gut Microbiome Project to study the ecology of DSV and the associations of DSV and host health parameters. Phylogenetic analysis showed that Desulfovibrio piger might be the most common and abundant DSV species in the GGMP. Predominant sub-OTUs of DSV were positively associated with bacterial community diversity. The relative abundance of DSV was positively correlated with beneficial genera, including Oscillospira, Coprococcus,Ruminococcus,Akkermansia, Roseburia,Faecalibacterium, andBacteroides, and was negatively associated with harmful genera, such as Clostridium,Escherichia,Klebsiella, and Ralstonia. Moreover, the relative abundance of DSV was negatively correlated with body mass index, waist size, triglyceride levels, and uric acid levels. This suggests that DSV is associated with healthy hosts in some human populations. |
format | Online Article Text |
id | pubmed-8380029 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-83800292021-08-30 Desulfovibrio is not always associated with adverse health effects in the Guangdong Gut Microbiome Project Chen, Yi-ran Jing, Qin-long Chen, Fang-lan Zheng, Huimin Chen, Li-dan Yang, Zhi-cong PeerJ Bioinformatics Desulfovibrio (DSV) is frequently found in the human intestine but limited knowledge is available regarding the relationship between DSV and host health. In this study, we analyzed large-scale cohort data from the Guangdong Gut Microbiome Project to study the ecology of DSV and the associations of DSV and host health parameters. Phylogenetic analysis showed that Desulfovibrio piger might be the most common and abundant DSV species in the GGMP. Predominant sub-OTUs of DSV were positively associated with bacterial community diversity. The relative abundance of DSV was positively correlated with beneficial genera, including Oscillospira, Coprococcus,Ruminococcus,Akkermansia, Roseburia,Faecalibacterium, andBacteroides, and was negatively associated with harmful genera, such as Clostridium,Escherichia,Klebsiella, and Ralstonia. Moreover, the relative abundance of DSV was negatively correlated with body mass index, waist size, triglyceride levels, and uric acid levels. This suggests that DSV is associated with healthy hosts in some human populations. PeerJ Inc. 2021-08-18 /pmc/articles/PMC8380029/ /pubmed/34466295 http://dx.doi.org/10.7717/peerj.12033 Text en ©2021 Chen et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Chen, Yi-ran Jing, Qin-long Chen, Fang-lan Zheng, Huimin Chen, Li-dan Yang, Zhi-cong Desulfovibrio is not always associated with adverse health effects in the Guangdong Gut Microbiome Project |
title | Desulfovibrio is not always associated with adverse health effects in the Guangdong Gut Microbiome Project |
title_full | Desulfovibrio is not always associated with adverse health effects in the Guangdong Gut Microbiome Project |
title_fullStr | Desulfovibrio is not always associated with adverse health effects in the Guangdong Gut Microbiome Project |
title_full_unstemmed | Desulfovibrio is not always associated with adverse health effects in the Guangdong Gut Microbiome Project |
title_short | Desulfovibrio is not always associated with adverse health effects in the Guangdong Gut Microbiome Project |
title_sort | desulfovibrio is not always associated with adverse health effects in the guangdong gut microbiome project |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8380029/ https://www.ncbi.nlm.nih.gov/pubmed/34466295 http://dx.doi.org/10.7717/peerj.12033 |
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