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Designing a highly immunogenic multi epitope based subunit vaccine against Bacillus cereus
OBJECTIVE: Serious non-gastrointestinal-tract infections and food poisoning are caused by Bacillus cereus. Vaccination against B. cereus is very important. The aim of this study was to identify and analyze B and T cell epitopes for chromate transporter protein of the bacteria. METHODS: Multiple sequ...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381030/ https://www.ncbi.nlm.nih.gov/pubmed/34466059 http://dx.doi.org/10.1016/j.sjbs.2021.06.082 |
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author | Asif Rasheed, Muhammad Awais, Muhammad Aldhahrani, Adil Althobaiti, Fayez Alhazmi, Alaa Sattar, Sobia Afzal, Umara Ali Baeshen, Hosam Ali El Enshasy, Hesham Joe Dailin, Daniel AL-surhanee, Ameena A. Kabir, Faryal |
author_facet | Asif Rasheed, Muhammad Awais, Muhammad Aldhahrani, Adil Althobaiti, Fayez Alhazmi, Alaa Sattar, Sobia Afzal, Umara Ali Baeshen, Hosam Ali El Enshasy, Hesham Joe Dailin, Daniel AL-surhanee, Ameena A. Kabir, Faryal |
author_sort | Asif Rasheed, Muhammad |
collection | PubMed |
description | OBJECTIVE: Serious non-gastrointestinal-tract infections and food poisoning are caused by Bacillus cereus. Vaccination against B. cereus is very important. The aim of this study was to identify and analyze B and T cell epitopes for chromate transporter protein of the bacteria. METHODS: Multiple sequence alignment with the Clustal Omega method was used to identify conserved regions and Geneious Prime was used to produce a consensus sequence. T and B cell epitopes were predicted by various computational tools from the NetCTL and Immune Epitope Database (IEDB), respectively. RESULTS: Altogether, 6 HTL cells and 11 CTL epitopes were predicted. This vaccine's molecular docking is done with Patch Dock and LigPlot to verify interactions. The immune server (C-IMMSIM) was used to develop In silico immune response in order to assess the multi-epitope vaccine's immunogenic profile. CONCLUSION: We designed universal vaccine against B. cereus responsible for food poisoning. The disease may be avoided with the aid of the proposed epitope-based vaccine. |
format | Online Article Text |
id | pubmed-8381030 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-83810302021-08-30 Designing a highly immunogenic multi epitope based subunit vaccine against Bacillus cereus Asif Rasheed, Muhammad Awais, Muhammad Aldhahrani, Adil Althobaiti, Fayez Alhazmi, Alaa Sattar, Sobia Afzal, Umara Ali Baeshen, Hosam Ali El Enshasy, Hesham Joe Dailin, Daniel AL-surhanee, Ameena A. Kabir, Faryal Saudi J Biol Sci Original Article OBJECTIVE: Serious non-gastrointestinal-tract infections and food poisoning are caused by Bacillus cereus. Vaccination against B. cereus is very important. The aim of this study was to identify and analyze B and T cell epitopes for chromate transporter protein of the bacteria. METHODS: Multiple sequence alignment with the Clustal Omega method was used to identify conserved regions and Geneious Prime was used to produce a consensus sequence. T and B cell epitopes were predicted by various computational tools from the NetCTL and Immune Epitope Database (IEDB), respectively. RESULTS: Altogether, 6 HTL cells and 11 CTL epitopes were predicted. This vaccine's molecular docking is done with Patch Dock and LigPlot to verify interactions. The immune server (C-IMMSIM) was used to develop In silico immune response in order to assess the multi-epitope vaccine's immunogenic profile. CONCLUSION: We designed universal vaccine against B. cereus responsible for food poisoning. The disease may be avoided with the aid of the proposed epitope-based vaccine. Elsevier 2021-09 2021-07-01 /pmc/articles/PMC8381030/ /pubmed/34466059 http://dx.doi.org/10.1016/j.sjbs.2021.06.082 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Asif Rasheed, Muhammad Awais, Muhammad Aldhahrani, Adil Althobaiti, Fayez Alhazmi, Alaa Sattar, Sobia Afzal, Umara Ali Baeshen, Hosam Ali El Enshasy, Hesham Joe Dailin, Daniel AL-surhanee, Ameena A. Kabir, Faryal Designing a highly immunogenic multi epitope based subunit vaccine against Bacillus cereus |
title | Designing a highly immunogenic multi epitope based subunit vaccine against Bacillus cereus |
title_full | Designing a highly immunogenic multi epitope based subunit vaccine against Bacillus cereus |
title_fullStr | Designing a highly immunogenic multi epitope based subunit vaccine against Bacillus cereus |
title_full_unstemmed | Designing a highly immunogenic multi epitope based subunit vaccine against Bacillus cereus |
title_short | Designing a highly immunogenic multi epitope based subunit vaccine against Bacillus cereus |
title_sort | designing a highly immunogenic multi epitope based subunit vaccine against bacillus cereus |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381030/ https://www.ncbi.nlm.nih.gov/pubmed/34466059 http://dx.doi.org/10.1016/j.sjbs.2021.06.082 |
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