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Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran
OBJECTIVE: Trueperella pyogenes has been considered a major causative agent of metritis, abortion, and death in a broad range of domestic and wild animals, including cattle, swine, sheep, goats, camels, buffalo, deer, antelopes, reptiles, and birds. DATA DESCRIPTION: Here, we report the complete chr...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381550/ https://www.ncbi.nlm.nih.gov/pubmed/34425879 http://dx.doi.org/10.1186/s13104-021-05734-1 |
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author | Ashrafi Tamai, Iradj Mohammadzadeh, Abdolmajid Ghalyanchi Langeroudi, Arash Mahmoodi, Pezhman Ziafati Kafi, Zahra Pakbin, Babak Zahraei Salehi, Taghi |
author_facet | Ashrafi Tamai, Iradj Mohammadzadeh, Abdolmajid Ghalyanchi Langeroudi, Arash Mahmoodi, Pezhman Ziafati Kafi, Zahra Pakbin, Babak Zahraei Salehi, Taghi |
author_sort | Ashrafi Tamai, Iradj |
collection | PubMed |
description | OBJECTIVE: Trueperella pyogenes has been considered a major causative agent of metritis, abortion, and death in a broad range of domestic and wild animals, including cattle, swine, sheep, goats, camels, buffalo, deer, antelopes, reptiles, and birds. DATA DESCRIPTION: Here, we report the complete chromosome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) died due to the infection caused by this pathogen. The genome assembly comprised 2,338,282 bp, with a 59.5% GC content. Annotation of the genome showed 46 tRNA genes, 6 rRNA, 1 CRISPR and 2059 coding sequences. Also, several genes coding for antimicrobial resistance such as tetW and virulence factor including plo, nanH, nanP, cbp and 4 fimbrial proteins were found. This study will advance our knowledge regarding the metabolism, virulence factors, antibiotic resistance and evolution of Arash114 strain and serve as an appropriate template for future researches. |
format | Online Article Text |
id | pubmed-8381550 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-83815502021-08-23 Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran Ashrafi Tamai, Iradj Mohammadzadeh, Abdolmajid Ghalyanchi Langeroudi, Arash Mahmoodi, Pezhman Ziafati Kafi, Zahra Pakbin, Babak Zahraei Salehi, Taghi BMC Res Notes Data Note OBJECTIVE: Trueperella pyogenes has been considered a major causative agent of metritis, abortion, and death in a broad range of domestic and wild animals, including cattle, swine, sheep, goats, camels, buffalo, deer, antelopes, reptiles, and birds. DATA DESCRIPTION: Here, we report the complete chromosome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) died due to the infection caused by this pathogen. The genome assembly comprised 2,338,282 bp, with a 59.5% GC content. Annotation of the genome showed 46 tRNA genes, 6 rRNA, 1 CRISPR and 2059 coding sequences. Also, several genes coding for antimicrobial resistance such as tetW and virulence factor including plo, nanH, nanP, cbp and 4 fimbrial proteins were found. This study will advance our knowledge regarding the metabolism, virulence factors, antibiotic resistance and evolution of Arash114 strain and serve as an appropriate template for future researches. BioMed Central 2021-08-23 /pmc/articles/PMC8381550/ /pubmed/34425879 http://dx.doi.org/10.1186/s13104-021-05734-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Data Note Ashrafi Tamai, Iradj Mohammadzadeh, Abdolmajid Ghalyanchi Langeroudi, Arash Mahmoodi, Pezhman Ziafati Kafi, Zahra Pakbin, Babak Zahraei Salehi, Taghi Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran |
title | Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran |
title_full | Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran |
title_fullStr | Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran |
title_full_unstemmed | Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran |
title_short | Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran |
title_sort | complete genome sequence of trueperella pyogenes strain arash114, isolated from the uterus of a water buffalo (bubalus bubalis) in iran |
topic | Data Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381550/ https://www.ncbi.nlm.nih.gov/pubmed/34425879 http://dx.doi.org/10.1186/s13104-021-05734-1 |
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