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Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran

OBJECTIVE: Trueperella pyogenes has been considered a major causative agent of metritis, abortion, and death in a broad range of domestic and wild animals, including cattle, swine, sheep, goats, camels, buffalo, deer, antelopes, reptiles, and birds. DATA DESCRIPTION: Here, we report the complete chr...

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Autores principales: Ashrafi Tamai, Iradj, Mohammadzadeh, Abdolmajid, Ghalyanchi Langeroudi, Arash, Mahmoodi, Pezhman, Ziafati Kafi, Zahra, Pakbin, Babak, Zahraei Salehi, Taghi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381550/
https://www.ncbi.nlm.nih.gov/pubmed/34425879
http://dx.doi.org/10.1186/s13104-021-05734-1
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author Ashrafi Tamai, Iradj
Mohammadzadeh, Abdolmajid
Ghalyanchi Langeroudi, Arash
Mahmoodi, Pezhman
Ziafati Kafi, Zahra
Pakbin, Babak
Zahraei Salehi, Taghi
author_facet Ashrafi Tamai, Iradj
Mohammadzadeh, Abdolmajid
Ghalyanchi Langeroudi, Arash
Mahmoodi, Pezhman
Ziafati Kafi, Zahra
Pakbin, Babak
Zahraei Salehi, Taghi
author_sort Ashrafi Tamai, Iradj
collection PubMed
description OBJECTIVE: Trueperella pyogenes has been considered a major causative agent of metritis, abortion, and death in a broad range of domestic and wild animals, including cattle, swine, sheep, goats, camels, buffalo, deer, antelopes, reptiles, and birds. DATA DESCRIPTION: Here, we report the complete chromosome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) died due to the infection caused by this pathogen. The genome assembly comprised 2,338,282 bp, with a 59.5% GC content. Annotation of the genome showed 46 tRNA genes, 6 rRNA, 1 CRISPR and 2059 coding sequences. Also, several genes coding for antimicrobial resistance such as tetW and virulence factor including plo, nanH, nanP, cbp and 4 fimbrial proteins were found. This study will advance our knowledge regarding the metabolism, virulence factors, antibiotic resistance and evolution of Arash114 strain and serve as an appropriate template for future researches.
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spelling pubmed-83815502021-08-23 Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran Ashrafi Tamai, Iradj Mohammadzadeh, Abdolmajid Ghalyanchi Langeroudi, Arash Mahmoodi, Pezhman Ziafati Kafi, Zahra Pakbin, Babak Zahraei Salehi, Taghi BMC Res Notes Data Note OBJECTIVE: Trueperella pyogenes has been considered a major causative agent of metritis, abortion, and death in a broad range of domestic and wild animals, including cattle, swine, sheep, goats, camels, buffalo, deer, antelopes, reptiles, and birds. DATA DESCRIPTION: Here, we report the complete chromosome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) died due to the infection caused by this pathogen. The genome assembly comprised 2,338,282 bp, with a 59.5% GC content. Annotation of the genome showed 46 tRNA genes, 6 rRNA, 1 CRISPR and 2059 coding sequences. Also, several genes coding for antimicrobial resistance such as tetW and virulence factor including plo, nanH, nanP, cbp and 4 fimbrial proteins were found. This study will advance our knowledge regarding the metabolism, virulence factors, antibiotic resistance and evolution of Arash114 strain and serve as an appropriate template for future researches. BioMed Central 2021-08-23 /pmc/articles/PMC8381550/ /pubmed/34425879 http://dx.doi.org/10.1186/s13104-021-05734-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Data Note
Ashrafi Tamai, Iradj
Mohammadzadeh, Abdolmajid
Ghalyanchi Langeroudi, Arash
Mahmoodi, Pezhman
Ziafati Kafi, Zahra
Pakbin, Babak
Zahraei Salehi, Taghi
Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran
title Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran
title_full Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran
title_fullStr Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran
title_full_unstemmed Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran
title_short Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran
title_sort complete genome sequence of trueperella pyogenes strain arash114, isolated from the uterus of a water buffalo (bubalus bubalis) in iran
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381550/
https://www.ncbi.nlm.nih.gov/pubmed/34425879
http://dx.doi.org/10.1186/s13104-021-05734-1
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