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Identification of Biomarkers Related to Prognosis of Bladder Transitional Cell Carcinoma

Bladder transitional cell carcinoma (BTCC) is highly fatal and generally has a poor prognosis. To improve the prognosis of patients with BTCC, it is particularly important to identify biomarkers related to the prognosis. In this study, differentially expressed messenger RNAs were obtained by analyzi...

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Autores principales: Liu, Zhihua, Xu, Lina, Lin, Youcheng, Hong, Huaishan, Wei, Yongbao, Ye, Liefu, Wu, Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381732/
https://www.ncbi.nlm.nih.gov/pubmed/34434217
http://dx.doi.org/10.3389/fgene.2021.682237
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author Liu, Zhihua
Xu, Lina
Lin, Youcheng
Hong, Huaishan
Wei, Yongbao
Ye, Liefu
Wu, Xiang
author_facet Liu, Zhihua
Xu, Lina
Lin, Youcheng
Hong, Huaishan
Wei, Yongbao
Ye, Liefu
Wu, Xiang
author_sort Liu, Zhihua
collection PubMed
description Bladder transitional cell carcinoma (BTCC) is highly fatal and generally has a poor prognosis. To improve the prognosis of patients with BTCC, it is particularly important to identify biomarkers related to the prognosis. In this study, differentially expressed messenger RNAs were obtained by analyzing relevant data of BTCC from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases. Next, hub genes that were suitable for correlation analysis with prognosis were determined through constructing a protein–protein interaction (PPI) network of differentially expressed genes and screening of major modules in the network. Finally, survival analysis of these hub genes found that three of them (CCNB1, ASPM, and ACTC1) were conspicuously related to the prognosis of patients with BTCC (p < 0.05). By combining the clinical features of BTCC and the expression levels of the three genes, univariate Cox and multivariate Cox regression analyses were performed and denoted that CCNB1 could be used as an independent prognostic factor for BTCC. This study provided potential biomarkers for the prognosis of BTCC as well as a theoretical basis for subsequent prognosis-related research.
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spelling pubmed-83817322021-08-24 Identification of Biomarkers Related to Prognosis of Bladder Transitional Cell Carcinoma Liu, Zhihua Xu, Lina Lin, Youcheng Hong, Huaishan Wei, Yongbao Ye, Liefu Wu, Xiang Front Genet Genetics Bladder transitional cell carcinoma (BTCC) is highly fatal and generally has a poor prognosis. To improve the prognosis of patients with BTCC, it is particularly important to identify biomarkers related to the prognosis. In this study, differentially expressed messenger RNAs were obtained by analyzing relevant data of BTCC from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases. Next, hub genes that were suitable for correlation analysis with prognosis were determined through constructing a protein–protein interaction (PPI) network of differentially expressed genes and screening of major modules in the network. Finally, survival analysis of these hub genes found that three of them (CCNB1, ASPM, and ACTC1) were conspicuously related to the prognosis of patients with BTCC (p < 0.05). By combining the clinical features of BTCC and the expression levels of the three genes, univariate Cox and multivariate Cox regression analyses were performed and denoted that CCNB1 could be used as an independent prognostic factor for BTCC. This study provided potential biomarkers for the prognosis of BTCC as well as a theoretical basis for subsequent prognosis-related research. Frontiers Media S.A. 2021-08-09 /pmc/articles/PMC8381732/ /pubmed/34434217 http://dx.doi.org/10.3389/fgene.2021.682237 Text en Copyright © 2021 Liu, Xu, Lin, Hong, Wei, Ye and Wu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Liu, Zhihua
Xu, Lina
Lin, Youcheng
Hong, Huaishan
Wei, Yongbao
Ye, Liefu
Wu, Xiang
Identification of Biomarkers Related to Prognosis of Bladder Transitional Cell Carcinoma
title Identification of Biomarkers Related to Prognosis of Bladder Transitional Cell Carcinoma
title_full Identification of Biomarkers Related to Prognosis of Bladder Transitional Cell Carcinoma
title_fullStr Identification of Biomarkers Related to Prognosis of Bladder Transitional Cell Carcinoma
title_full_unstemmed Identification of Biomarkers Related to Prognosis of Bladder Transitional Cell Carcinoma
title_short Identification of Biomarkers Related to Prognosis of Bladder Transitional Cell Carcinoma
title_sort identification of biomarkers related to prognosis of bladder transitional cell carcinoma
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381732/
https://www.ncbi.nlm.nih.gov/pubmed/34434217
http://dx.doi.org/10.3389/fgene.2021.682237
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