MITOGENOME ANNOUNCEMENTSCharacterization of the complete chloroplast genome of the Chinese endangered species Cymbidium iridioides D. Don

Cymbidium iridioides D. Don 1852 is a Class I endangered species in China having important ornamental and breeding values. This study used Illumina high-throughput sequencing technology to sequence the complete chloroplast genome of C. iridioides. The genome features of C. iridioides and its phyloge...

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Autores principales: Cheng, Longjie, Xu, Yantao, Li, Zhilin, Zhao, Yiran, He, Fengmei, Wang, Yuying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381904/
https://www.ncbi.nlm.nih.gov/pubmed/34435113
http://dx.doi.org/10.1080/23802359.2021.1964398
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author Cheng, Longjie
Xu, Yantao
Li, Zhilin
Zhao, Yiran
He, Fengmei
Wang, Yuying
author_facet Cheng, Longjie
Xu, Yantao
Li, Zhilin
Zhao, Yiran
He, Fengmei
Wang, Yuying
author_sort Cheng, Longjie
collection PubMed
description Cymbidium iridioides D. Don 1852 is a Class I endangered species in China having important ornamental and breeding values. This study used Illumina high-throughput sequencing technology to sequence the complete chloroplast genome of C. iridioides. The genome features of C. iridioides and its phylogenetic relationships were determined. The complete chloroplast genome is 156,599 bp, containing a pair of 26,736 bp inverse duplication regions, a large 85,242 bp single-copy region, and a small 17,885 bp single-copy region. The entire genome contains 76 protein-coding genes, 37 tRNA genes, and 4 rRNA genes. A phylogenetic tree of 25 Orchidaceae species revealed that C. iridioides was grouped within Sect. Iridorchis and comprised a clade with Cymbidium tracyanum.
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spelling pubmed-83819042021-08-24 MITOGENOME ANNOUNCEMENTSCharacterization of the complete chloroplast genome of the Chinese endangered species Cymbidium iridioides D. Don Cheng, Longjie Xu, Yantao Li, Zhilin Zhao, Yiran He, Fengmei Wang, Yuying Mitochondrial DNA B Resour Mitogenome Announcement Cymbidium iridioides D. Don 1852 is a Class I endangered species in China having important ornamental and breeding values. This study used Illumina high-throughput sequencing technology to sequence the complete chloroplast genome of C. iridioides. The genome features of C. iridioides and its phylogenetic relationships were determined. The complete chloroplast genome is 156,599 bp, containing a pair of 26,736 bp inverse duplication regions, a large 85,242 bp single-copy region, and a small 17,885 bp single-copy region. The entire genome contains 76 protein-coding genes, 37 tRNA genes, and 4 rRNA genes. A phylogenetic tree of 25 Orchidaceae species revealed that C. iridioides was grouped within Sect. Iridorchis and comprised a clade with Cymbidium tracyanum. Taylor & Francis 2021-08-17 /pmc/articles/PMC8381904/ /pubmed/34435113 http://dx.doi.org/10.1080/23802359.2021.1964398 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Cheng, Longjie
Xu, Yantao
Li, Zhilin
Zhao, Yiran
He, Fengmei
Wang, Yuying
MITOGENOME ANNOUNCEMENTSCharacterization of the complete chloroplast genome of the Chinese endangered species Cymbidium iridioides D. Don
title MITOGENOME ANNOUNCEMENTSCharacterization of the complete chloroplast genome of the Chinese endangered species Cymbidium iridioides D. Don
title_full MITOGENOME ANNOUNCEMENTSCharacterization of the complete chloroplast genome of the Chinese endangered species Cymbidium iridioides D. Don
title_fullStr MITOGENOME ANNOUNCEMENTSCharacterization of the complete chloroplast genome of the Chinese endangered species Cymbidium iridioides D. Don
title_full_unstemmed MITOGENOME ANNOUNCEMENTSCharacterization of the complete chloroplast genome of the Chinese endangered species Cymbidium iridioides D. Don
title_short MITOGENOME ANNOUNCEMENTSCharacterization of the complete chloroplast genome of the Chinese endangered species Cymbidium iridioides D. Don
title_sort mitogenome announcementscharacterization of the complete chloroplast genome of the chinese endangered species cymbidium iridioides d. don
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381904/
https://www.ncbi.nlm.nih.gov/pubmed/34435113
http://dx.doi.org/10.1080/23802359.2021.1964398
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