Complete mitochondrial genome of nipa palm hispid beetle Octodonta nipae Maulik (Coleoptera: Chrysomelidae: Cassidinae)

Octodonta nipae (Maulik 1921) is a dangerous forestry quarantine pest, which mainly harms palms. In the present study, we determined complete mitogenome of O. nipae. This mitogenome was 15,397 bp in length (GenBank Accession no. MW802252), which contained 2 ribosomal RNA genes, 22 transfer RNAs, 13...

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Autores principales: Yan, Sanqiang, Lyu, Baoqian, Tang, Xue, Lu, Hui, Tang, Jihong, Meng, Rui, Cai, Bo, Yang, Fan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381925/
https://www.ncbi.nlm.nih.gov/pubmed/34435108
http://dx.doi.org/10.1080/23802359.2021.1934172
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author Yan, Sanqiang
Lyu, Baoqian
Tang, Xue
Lu, Hui
Tang, Jihong
Meng, Rui
Cai, Bo
Yang, Fan
author_facet Yan, Sanqiang
Lyu, Baoqian
Tang, Xue
Lu, Hui
Tang, Jihong
Meng, Rui
Cai, Bo
Yang, Fan
author_sort Yan, Sanqiang
collection PubMed
description Octodonta nipae (Maulik 1921) is a dangerous forestry quarantine pest, which mainly harms palms. In the present study, we determined complete mitogenome of O. nipae. This mitogenome was 15,397 bp in length (GenBank Accession no. MW802252), which contained 2 ribosomal RNA genes, 22 transfer RNAs, 13 protein-coding genes (PCGs) and one non-coding AT-rich region with the length of 883 bp. All of the 22 tRNA genes displayed a typical clover-leaf structure, with the exception of tRNA(Phe), tRNA(Leu), tRNA(Asn), tRNA(Pro) and tRNA(Thr). Twelve PCGs were initiated by ATN codons, and NAD1 started with TTG. Ten PCGs used the typical stop codon ‘TAA’ and ‘TGA’, while three PCGs (COX2, COX3, NAD4) used the incomplete stop codons ‘TA’ or ‘T’. Phylogenetic tree demonstrated that O. nipae belongs to the family Chrysomelidae and closer to the superfamily Cassidinae.
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spelling pubmed-83819252021-08-24 Complete mitochondrial genome of nipa palm hispid beetle Octodonta nipae Maulik (Coleoptera: Chrysomelidae: Cassidinae) Yan, Sanqiang Lyu, Baoqian Tang, Xue Lu, Hui Tang, Jihong Meng, Rui Cai, Bo Yang, Fan Mitochondrial DNA B Resour Mitogenome Announcement Octodonta nipae (Maulik 1921) is a dangerous forestry quarantine pest, which mainly harms palms. In the present study, we determined complete mitogenome of O. nipae. This mitogenome was 15,397 bp in length (GenBank Accession no. MW802252), which contained 2 ribosomal RNA genes, 22 transfer RNAs, 13 protein-coding genes (PCGs) and one non-coding AT-rich region with the length of 883 bp. All of the 22 tRNA genes displayed a typical clover-leaf structure, with the exception of tRNA(Phe), tRNA(Leu), tRNA(Asn), tRNA(Pro) and tRNA(Thr). Twelve PCGs were initiated by ATN codons, and NAD1 started with TTG. Ten PCGs used the typical stop codon ‘TAA’ and ‘TGA’, while three PCGs (COX2, COX3, NAD4) used the incomplete stop codons ‘TA’ or ‘T’. Phylogenetic tree demonstrated that O. nipae belongs to the family Chrysomelidae and closer to the superfamily Cassidinae. Taylor & Francis 2021-08-16 /pmc/articles/PMC8381925/ /pubmed/34435108 http://dx.doi.org/10.1080/23802359.2021.1934172 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yan, Sanqiang
Lyu, Baoqian
Tang, Xue
Lu, Hui
Tang, Jihong
Meng, Rui
Cai, Bo
Yang, Fan
Complete mitochondrial genome of nipa palm hispid beetle Octodonta nipae Maulik (Coleoptera: Chrysomelidae: Cassidinae)
title Complete mitochondrial genome of nipa palm hispid beetle Octodonta nipae Maulik (Coleoptera: Chrysomelidae: Cassidinae)
title_full Complete mitochondrial genome of nipa palm hispid beetle Octodonta nipae Maulik (Coleoptera: Chrysomelidae: Cassidinae)
title_fullStr Complete mitochondrial genome of nipa palm hispid beetle Octodonta nipae Maulik (Coleoptera: Chrysomelidae: Cassidinae)
title_full_unstemmed Complete mitochondrial genome of nipa palm hispid beetle Octodonta nipae Maulik (Coleoptera: Chrysomelidae: Cassidinae)
title_short Complete mitochondrial genome of nipa palm hispid beetle Octodonta nipae Maulik (Coleoptera: Chrysomelidae: Cassidinae)
title_sort complete mitochondrial genome of nipa palm hispid beetle octodonta nipae maulik (coleoptera: chrysomelidae: cassidinae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381925/
https://www.ncbi.nlm.nih.gov/pubmed/34435108
http://dx.doi.org/10.1080/23802359.2021.1934172
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