The complete chloroplast genome sequence of Brachypodium sylvaticum

The first complete chloroplast genome (cpDNA) sequence of Brachypodium sylvaticum was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 136,392 bp in length, contains a large single-copy region (LSC) of 80,854 bp and a small single-copy region (SSC) of 12,765 bp, wh...

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Detalles Bibliográficos
Autores principales: Wang, Yunqiang, Wang, Yi, Yuan, Xiaolong, Li, Yunqin, Wang, Qinghua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381940/
https://www.ncbi.nlm.nih.gov/pubmed/34435123
http://dx.doi.org/10.1080/23802359.2021.1966337
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author Wang, Yunqiang
Wang, Yi
Yuan, Xiaolong
Li, Yunqin
Wang, Qinghua
author_facet Wang, Yunqiang
Wang, Yi
Yuan, Xiaolong
Li, Yunqin
Wang, Qinghua
author_sort Wang, Yunqiang
collection PubMed
description The first complete chloroplast genome (cpDNA) sequence of Brachypodium sylvaticum was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 136,392 bp in length, contains a large single-copy region (LSC) of 80,854 bp and a small single-copy region (SSC) of 12,765 bp, which were separated by a pair of inverted repeats (IR) regions of 21,383 bp. The genome contains 130 genes, including 84 protein-coding genes, 8 ribosomal RNA genes, and 38 transfer RNA genes. Further phylogenomic analysis showed that B. sylvaticum and B. distachyon clustered in a unique clade in Brachypodium genus.
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spelling pubmed-83819402021-08-24 The complete chloroplast genome sequence of Brachypodium sylvaticum Wang, Yunqiang Wang, Yi Yuan, Xiaolong Li, Yunqin Wang, Qinghua Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome (cpDNA) sequence of Brachypodium sylvaticum was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 136,392 bp in length, contains a large single-copy region (LSC) of 80,854 bp and a small single-copy region (SSC) of 12,765 bp, which were separated by a pair of inverted repeats (IR) regions of 21,383 bp. The genome contains 130 genes, including 84 protein-coding genes, 8 ribosomal RNA genes, and 38 transfer RNA genes. Further phylogenomic analysis showed that B. sylvaticum and B. distachyon clustered in a unique clade in Brachypodium genus. Taylor & Francis 2021-08-18 /pmc/articles/PMC8381940/ /pubmed/34435123 http://dx.doi.org/10.1080/23802359.2021.1966337 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Yunqiang
Wang, Yi
Yuan, Xiaolong
Li, Yunqin
Wang, Qinghua
The complete chloroplast genome sequence of Brachypodium sylvaticum
title The complete chloroplast genome sequence of Brachypodium sylvaticum
title_full The complete chloroplast genome sequence of Brachypodium sylvaticum
title_fullStr The complete chloroplast genome sequence of Brachypodium sylvaticum
title_full_unstemmed The complete chloroplast genome sequence of Brachypodium sylvaticum
title_short The complete chloroplast genome sequence of Brachypodium sylvaticum
title_sort complete chloroplast genome sequence of brachypodium sylvaticum
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381940/
https://www.ncbi.nlm.nih.gov/pubmed/34435123
http://dx.doi.org/10.1080/23802359.2021.1966337
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