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The complete chloroplast genome of a medicinal plant Viscum articulatum Burm.f. (Loranthaceae)
Viscum articulatum is usually used as famous ethno-medicinal plant and popular drink in many provinces of China. In this study, the characterization of the complete chloroplast genome of V. articulatum was analyzed using the Illumina NovaSeq platform. The whole chloroplast genome sequence of V. arti...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381967/ https://www.ncbi.nlm.nih.gov/pubmed/34435106 http://dx.doi.org/10.1080/23802359.2021.1962760 |
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author | Zhang, Yuan Deng, Chongli Yang, Junwen Wang, Dexin Deng, Guobin |
author_facet | Zhang, Yuan Deng, Chongli Yang, Junwen Wang, Dexin Deng, Guobin |
author_sort | Zhang, Yuan |
collection | PubMed |
description | Viscum articulatum is usually used as famous ethno-medicinal plant and popular drink in many provinces of China. In this study, the characterization of the complete chloroplast genome of V. articulatum was analyzed using the Illumina NovaSeq platform. The whole chloroplast genome sequence of V. articulatum is 131,825 including a large single-copy region (LSC, 76,069 bp), a small single-copy region (SSC, 8990 bp), and a pair of repeated regions (IRs, 23,383 bp, each). Further gene annotation in our study revealed the chloroplast genome contains 114 genes, including 36 tRNA genes, 8 rRNA genes and 70 protein-coding genes. A total of 118 simple sequence repeats (SSRs) were identified in the chloroplast genome. Phylogenetic development was analyzed based on V. articulatum with other species of Loranthaceae, the phylogenetic tree in our study revealed that V. articulatum is a lineage independent of other species in genus Viscum. |
format | Online Article Text |
id | pubmed-8381967 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-83819672021-08-24 The complete chloroplast genome of a medicinal plant Viscum articulatum Burm.f. (Loranthaceae) Zhang, Yuan Deng, Chongli Yang, Junwen Wang, Dexin Deng, Guobin Mitochondrial DNA B Resour Mitogenome Announcement Viscum articulatum is usually used as famous ethno-medicinal plant and popular drink in many provinces of China. In this study, the characterization of the complete chloroplast genome of V. articulatum was analyzed using the Illumina NovaSeq platform. The whole chloroplast genome sequence of V. articulatum is 131,825 including a large single-copy region (LSC, 76,069 bp), a small single-copy region (SSC, 8990 bp), and a pair of repeated regions (IRs, 23,383 bp, each). Further gene annotation in our study revealed the chloroplast genome contains 114 genes, including 36 tRNA genes, 8 rRNA genes and 70 protein-coding genes. A total of 118 simple sequence repeats (SSRs) were identified in the chloroplast genome. Phylogenetic development was analyzed based on V. articulatum with other species of Loranthaceae, the phylogenetic tree in our study revealed that V. articulatum is a lineage independent of other species in genus Viscum. Taylor & Francis 2021-08-16 /pmc/articles/PMC8381967/ /pubmed/34435106 http://dx.doi.org/10.1080/23802359.2021.1962760 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Yuan Deng, Chongli Yang, Junwen Wang, Dexin Deng, Guobin The complete chloroplast genome of a medicinal plant Viscum articulatum Burm.f. (Loranthaceae) |
title | The complete chloroplast genome of a medicinal plant Viscum articulatum Burm.f. (Loranthaceae) |
title_full | The complete chloroplast genome of a medicinal plant Viscum articulatum Burm.f. (Loranthaceae) |
title_fullStr | The complete chloroplast genome of a medicinal plant Viscum articulatum Burm.f. (Loranthaceae) |
title_full_unstemmed | The complete chloroplast genome of a medicinal plant Viscum articulatum Burm.f. (Loranthaceae) |
title_short | The complete chloroplast genome of a medicinal plant Viscum articulatum Burm.f. (Loranthaceae) |
title_sort | complete chloroplast genome of a medicinal plant viscum articulatum burm.f. (loranthaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8381967/ https://www.ncbi.nlm.nih.gov/pubmed/34435106 http://dx.doi.org/10.1080/23802359.2021.1962760 |
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