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Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem
Over the last decades the phase problem in macromolecular x-ray crystallography has become more controllable as methods and approaches have diversified and improved. However, solving the phase problem is still one of the biggest obstacles on the way of successfully determining a crystal structure. T...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8382735/ https://www.ncbi.nlm.nih.gov/pubmed/34426585 http://dx.doi.org/10.1038/s41598-021-95186-1 |
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author | Koelmel, Wolfgang Kuper, Jochen Kisker, Caroline |
author_facet | Koelmel, Wolfgang Kuper, Jochen Kisker, Caroline |
author_sort | Koelmel, Wolfgang |
collection | PubMed |
description | Over the last decades the phase problem in macromolecular x-ray crystallography has become more controllable as methods and approaches have diversified and improved. However, solving the phase problem is still one of the biggest obstacles on the way of successfully determining a crystal structure. To overcome this caveat, we have utilized the anomalous scattering properties of the heavy alkali metal cesium. We investigated the introduction of cesium in form of cesium chloride during the three major steps of protein treatment in crystallography: purification, crystallization, and cryo-protection. We derived a step-wise procedure encompassing a “quick-soak”-only approach and a combined approach of CsCl supplement during purification and cryo-protection. This procedure was successfully applied on two different proteins: (i) Lysozyme and (ii) as a proof of principle, a construct consisting of the PH domain of the TFIIH subunit p62 from Chaetomium thermophilum for de novo structure determination. Usage of CsCl thus provides a versatile, general, easy to use, and low cost phasing strategy. |
format | Online Article Text |
id | pubmed-8382735 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-83827352021-09-01 Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem Koelmel, Wolfgang Kuper, Jochen Kisker, Caroline Sci Rep Article Over the last decades the phase problem in macromolecular x-ray crystallography has become more controllable as methods and approaches have diversified and improved. However, solving the phase problem is still one of the biggest obstacles on the way of successfully determining a crystal structure. To overcome this caveat, we have utilized the anomalous scattering properties of the heavy alkali metal cesium. We investigated the introduction of cesium in form of cesium chloride during the three major steps of protein treatment in crystallography: purification, crystallization, and cryo-protection. We derived a step-wise procedure encompassing a “quick-soak”-only approach and a combined approach of CsCl supplement during purification and cryo-protection. This procedure was successfully applied on two different proteins: (i) Lysozyme and (ii) as a proof of principle, a construct consisting of the PH domain of the TFIIH subunit p62 from Chaetomium thermophilum for de novo structure determination. Usage of CsCl thus provides a versatile, general, easy to use, and low cost phasing strategy. Nature Publishing Group UK 2021-08-23 /pmc/articles/PMC8382735/ /pubmed/34426585 http://dx.doi.org/10.1038/s41598-021-95186-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Koelmel, Wolfgang Kuper, Jochen Kisker, Caroline Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem |
title | Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem |
title_full | Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem |
title_fullStr | Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem |
title_full_unstemmed | Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem |
title_short | Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem |
title_sort | cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8382735/ https://www.ncbi.nlm.nih.gov/pubmed/34426585 http://dx.doi.org/10.1038/s41598-021-95186-1 |
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