Cargando…

Identification of rice (Oryza sativa L.) genes involved in sheath blight resistance via a genome‐wide association study

Rice sheath blight (RSB) is an economically significant disease affecting rice yield worldwide. Genetic resistance to RSB is associated with multiple minor genes, with each providing a minor phenotypic effect, but the underlying dominant resistance genes remain unknown. A genome‐wide association stu...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Aijun, Shu, Xinyue, Jing, Xin, Jiao, Chengzhi, Chen, Lei, Zhang, Jinfeng, Ma, Li, Jiang, Yuqi, Yamamoto, Naoki, Li, Shuangcheng, Deng, Qiming, Wang, Shiquan, Zhu, Jun, Liang, Yueyang, Zou, Ting, Liu, Huainian, Wang, Lingxia, Huang, Yubi, Li, Ping, Zheng, Aiping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8384605/
https://www.ncbi.nlm.nih.gov/pubmed/33600077
http://dx.doi.org/10.1111/pbi.13569
_version_ 1783741947208269824
author Wang, Aijun
Shu, Xinyue
Jing, Xin
Jiao, Chengzhi
Chen, Lei
Zhang, Jinfeng
Ma, Li
Jiang, Yuqi
Yamamoto, Naoki
Li, Shuangcheng
Deng, Qiming
Wang, Shiquan
Zhu, Jun
Liang, Yueyang
Zou, Ting
Liu, Huainian
Wang, Lingxia
Huang, Yubi
Li, Ping
Zheng, Aiping
author_facet Wang, Aijun
Shu, Xinyue
Jing, Xin
Jiao, Chengzhi
Chen, Lei
Zhang, Jinfeng
Ma, Li
Jiang, Yuqi
Yamamoto, Naoki
Li, Shuangcheng
Deng, Qiming
Wang, Shiquan
Zhu, Jun
Liang, Yueyang
Zou, Ting
Liu, Huainian
Wang, Lingxia
Huang, Yubi
Li, Ping
Zheng, Aiping
author_sort Wang, Aijun
collection PubMed
description Rice sheath blight (RSB) is an economically significant disease affecting rice yield worldwide. Genetic resistance to RSB is associated with multiple minor genes, with each providing a minor phenotypic effect, but the underlying dominant resistance genes remain unknown. A genome‐wide association study (GWAS) of 259 diverse rice varieties, with genotypes based on a single nucleotide polymorphism (SNP) and haplotype, was conducted to assess their sheath blight reactions at three developmental stages (seedlings, tillering and booting). A total of 653 genes were correlated with sheath blight resistance, of which the disease resistance protein RPM1 (OsRSR1) and protein kinase domain‐containing protein (OsRLCK5) were validated by overexpression and knockdown assays. We further found that the coiled‐coil (CC) domain of OsRSR1 (OsRSR1‐CC) and full‐length OsRLCK5 interacted with serine hydroxymethyltransferase 1 (OsSHM1) and glutaredoxin (OsGRX20), respectively. It was found that OsSHM1, which has a role in the reactive oxygen species (ROS) burst, and OsGRX20 enhanced the antioxidation ability of plants. A regulation model of the new RSB resistance though the glutathione (GSH)‐ascorbic acid (AsA) antioxidant system was therefore revealed. These results enhance our understanding of RSB resistance mechanisms and provide better gene resources for the breeding of disease resistance in rice.
format Online
Article
Text
id pubmed-8384605
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-83846052021-08-30 Identification of rice (Oryza sativa L.) genes involved in sheath blight resistance via a genome‐wide association study Wang, Aijun Shu, Xinyue Jing, Xin Jiao, Chengzhi Chen, Lei Zhang, Jinfeng Ma, Li Jiang, Yuqi Yamamoto, Naoki Li, Shuangcheng Deng, Qiming Wang, Shiquan Zhu, Jun Liang, Yueyang Zou, Ting Liu, Huainian Wang, Lingxia Huang, Yubi Li, Ping Zheng, Aiping Plant Biotechnol J Research Articles Rice sheath blight (RSB) is an economically significant disease affecting rice yield worldwide. Genetic resistance to RSB is associated with multiple minor genes, with each providing a minor phenotypic effect, but the underlying dominant resistance genes remain unknown. A genome‐wide association study (GWAS) of 259 diverse rice varieties, with genotypes based on a single nucleotide polymorphism (SNP) and haplotype, was conducted to assess their sheath blight reactions at three developmental stages (seedlings, tillering and booting). A total of 653 genes were correlated with sheath blight resistance, of which the disease resistance protein RPM1 (OsRSR1) and protein kinase domain‐containing protein (OsRLCK5) were validated by overexpression and knockdown assays. We further found that the coiled‐coil (CC) domain of OsRSR1 (OsRSR1‐CC) and full‐length OsRLCK5 interacted with serine hydroxymethyltransferase 1 (OsSHM1) and glutaredoxin (OsGRX20), respectively. It was found that OsSHM1, which has a role in the reactive oxygen species (ROS) burst, and OsGRX20 enhanced the antioxidation ability of plants. A regulation model of the new RSB resistance though the glutathione (GSH)‐ascorbic acid (AsA) antioxidant system was therefore revealed. These results enhance our understanding of RSB resistance mechanisms and provide better gene resources for the breeding of disease resistance in rice. John Wiley and Sons Inc. 2021-03-18 2021-08 /pmc/articles/PMC8384605/ /pubmed/33600077 http://dx.doi.org/10.1111/pbi.13569 Text en © 2021 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Wang, Aijun
Shu, Xinyue
Jing, Xin
Jiao, Chengzhi
Chen, Lei
Zhang, Jinfeng
Ma, Li
Jiang, Yuqi
Yamamoto, Naoki
Li, Shuangcheng
Deng, Qiming
Wang, Shiquan
Zhu, Jun
Liang, Yueyang
Zou, Ting
Liu, Huainian
Wang, Lingxia
Huang, Yubi
Li, Ping
Zheng, Aiping
Identification of rice (Oryza sativa L.) genes involved in sheath blight resistance via a genome‐wide association study
title Identification of rice (Oryza sativa L.) genes involved in sheath blight resistance via a genome‐wide association study
title_full Identification of rice (Oryza sativa L.) genes involved in sheath blight resistance via a genome‐wide association study
title_fullStr Identification of rice (Oryza sativa L.) genes involved in sheath blight resistance via a genome‐wide association study
title_full_unstemmed Identification of rice (Oryza sativa L.) genes involved in sheath blight resistance via a genome‐wide association study
title_short Identification of rice (Oryza sativa L.) genes involved in sheath blight resistance via a genome‐wide association study
title_sort identification of rice (oryza sativa l.) genes involved in sheath blight resistance via a genome‐wide association study
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8384605/
https://www.ncbi.nlm.nih.gov/pubmed/33600077
http://dx.doi.org/10.1111/pbi.13569
work_keys_str_mv AT wangaijun identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT shuxinyue identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT jingxin identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT jiaochengzhi identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT chenlei identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT zhangjinfeng identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT mali identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT jiangyuqi identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT yamamotonaoki identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT lishuangcheng identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT dengqiming identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT wangshiquan identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT zhujun identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT liangyueyang identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT zouting identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT liuhuainian identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT wanglingxia identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT huangyubi identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT liping identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy
AT zhengaiping identificationofriceoryzasativalgenesinvolvedinsheathblightresistanceviaagenomewideassociationstudy