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Comparing recurrent convolutional neural networks for large scale bird species classification

We present a deep learning approach towards the large-scale prediction and analysis of bird acoustics from 100 different bird species. We use spectrograms constructed on bird audio recordings from the Cornell Bird Challenge (CBC)2020 dataset, which includes recordings of multiple and potentially ove...

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Autores principales: Gupta, Gaurav, Kshirsagar, Meghana, Zhong, Ming, Gholami, Shahrzad, Ferres, Juan Lavista
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8385065/
https://www.ncbi.nlm.nih.gov/pubmed/34429468
http://dx.doi.org/10.1038/s41598-021-96446-w
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author Gupta, Gaurav
Kshirsagar, Meghana
Zhong, Ming
Gholami, Shahrzad
Ferres, Juan Lavista
author_facet Gupta, Gaurav
Kshirsagar, Meghana
Zhong, Ming
Gholami, Shahrzad
Ferres, Juan Lavista
author_sort Gupta, Gaurav
collection PubMed
description We present a deep learning approach towards the large-scale prediction and analysis of bird acoustics from 100 different bird species. We use spectrograms constructed on bird audio recordings from the Cornell Bird Challenge (CBC)2020 dataset, which includes recordings of multiple and potentially overlapping bird vocalizations with background noise. Our experiments show that a hybrid modeling approach that involves a Convolutional Neural Network (CNN) for learning the representation for a slice of the spectrogram, and a Recurrent Neural Network (RNN) for the temporal component to combine across time-points leads to the most accurate model on this dataset. We show results on a spectrum of models ranging from stand-alone CNNs to hybrid models of various types obtained by combining CNNs with other CNNs or RNNs of the following types: Long Short-Term Memory (LSTM) networks, Gated Recurrent Units (GRU), and Legendre Memory Units (LMU). The best performing model achieves an average accuracy of 67% over the 100 different bird species, with the highest accuracy of 90% for the bird species, Red crossbill. We further analyze the learned representations visually and find them to be intuitive, where we find that related bird species are clustered close together. We present a novel way to empirically interpret the representations learned by the LMU-based hybrid model which shows how memory channel patterns change over time with the changes seen in the spectrograms.
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spelling pubmed-83850652021-09-01 Comparing recurrent convolutional neural networks for large scale bird species classification Gupta, Gaurav Kshirsagar, Meghana Zhong, Ming Gholami, Shahrzad Ferres, Juan Lavista Sci Rep Article We present a deep learning approach towards the large-scale prediction and analysis of bird acoustics from 100 different bird species. We use spectrograms constructed on bird audio recordings from the Cornell Bird Challenge (CBC)2020 dataset, which includes recordings of multiple and potentially overlapping bird vocalizations with background noise. Our experiments show that a hybrid modeling approach that involves a Convolutional Neural Network (CNN) for learning the representation for a slice of the spectrogram, and a Recurrent Neural Network (RNN) for the temporal component to combine across time-points leads to the most accurate model on this dataset. We show results on a spectrum of models ranging from stand-alone CNNs to hybrid models of various types obtained by combining CNNs with other CNNs or RNNs of the following types: Long Short-Term Memory (LSTM) networks, Gated Recurrent Units (GRU), and Legendre Memory Units (LMU). The best performing model achieves an average accuracy of 67% over the 100 different bird species, with the highest accuracy of 90% for the bird species, Red crossbill. We further analyze the learned representations visually and find them to be intuitive, where we find that related bird species are clustered close together. We present a novel way to empirically interpret the representations learned by the LMU-based hybrid model which shows how memory channel patterns change over time with the changes seen in the spectrograms. Nature Publishing Group UK 2021-08-24 /pmc/articles/PMC8385065/ /pubmed/34429468 http://dx.doi.org/10.1038/s41598-021-96446-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Gupta, Gaurav
Kshirsagar, Meghana
Zhong, Ming
Gholami, Shahrzad
Ferres, Juan Lavista
Comparing recurrent convolutional neural networks for large scale bird species classification
title Comparing recurrent convolutional neural networks for large scale bird species classification
title_full Comparing recurrent convolutional neural networks for large scale bird species classification
title_fullStr Comparing recurrent convolutional neural networks for large scale bird species classification
title_full_unstemmed Comparing recurrent convolutional neural networks for large scale bird species classification
title_short Comparing recurrent convolutional neural networks for large scale bird species classification
title_sort comparing recurrent convolutional neural networks for large scale bird species classification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8385065/
https://www.ncbi.nlm.nih.gov/pubmed/34429468
http://dx.doi.org/10.1038/s41598-021-96446-w
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