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Characterization of the complete chloroplast genome of Salix linearistipularis (Franch.) Hao 1936
We characterized the complete chloroplast genome of a perennial woody plant species, Salix linearistipularis, based on high-throughput sequencing and de novo assembly technology for the first time. The complete chloroplast genome of S. linearistipularis is 155,564 bp in length, comprising one large...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8386700/ https://www.ncbi.nlm.nih.gov/pubmed/34447893 http://dx.doi.org/10.1080/23802359.2021.1967809 |
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author | Ren, Rongrong Li, Xiaoping |
author_facet | Ren, Rongrong Li, Xiaoping |
author_sort | Ren, Rongrong |
collection | PubMed |
description | We characterized the complete chloroplast genome of a perennial woody plant species, Salix linearistipularis, based on high-throughput sequencing and de novo assembly technology for the first time. The complete chloroplast genome of S. linearistipularis is 155,564 bp in length, comprising one large single-copy region (LSC, 84,460 bp), one small single-copy region (SSC, 16,182 bp), and two inverted repeat regions (IRA and IRB, 27,461 bp). The GC content of the whole chloroplast genome was 36.69%. This chloroplast genome encodes a total of 132 genes, including 86 protein-coding genes, eight ribosomal RNA genes, and 37 tRNA genes. Phylogenetic analysis reveals that S. linearistipularis is grouped with 13 other Salix species in Salicaceae. |
format | Online Article Text |
id | pubmed-8386700 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-83867002021-08-25 Characterization of the complete chloroplast genome of Salix linearistipularis (Franch.) Hao 1936 Ren, Rongrong Li, Xiaoping Mitochondrial DNA B Resour Mitogenome Announcement We characterized the complete chloroplast genome of a perennial woody plant species, Salix linearistipularis, based on high-throughput sequencing and de novo assembly technology for the first time. The complete chloroplast genome of S. linearistipularis is 155,564 bp in length, comprising one large single-copy region (LSC, 84,460 bp), one small single-copy region (SSC, 16,182 bp), and two inverted repeat regions (IRA and IRB, 27,461 bp). The GC content of the whole chloroplast genome was 36.69%. This chloroplast genome encodes a total of 132 genes, including 86 protein-coding genes, eight ribosomal RNA genes, and 37 tRNA genes. Phylogenetic analysis reveals that S. linearistipularis is grouped with 13 other Salix species in Salicaceae. Taylor & Francis 2021-08-24 /pmc/articles/PMC8386700/ /pubmed/34447893 http://dx.doi.org/10.1080/23802359.2021.1967809 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Ren, Rongrong Li, Xiaoping Characterization of the complete chloroplast genome of Salix linearistipularis (Franch.) Hao 1936 |
title | Characterization of the complete chloroplast genome of Salix linearistipularis (Franch.) Hao 1936 |
title_full | Characterization of the complete chloroplast genome of Salix linearistipularis (Franch.) Hao 1936 |
title_fullStr | Characterization of the complete chloroplast genome of Salix linearistipularis (Franch.) Hao 1936 |
title_full_unstemmed | Characterization of the complete chloroplast genome of Salix linearistipularis (Franch.) Hao 1936 |
title_short | Characterization of the complete chloroplast genome of Salix linearistipularis (Franch.) Hao 1936 |
title_sort | characterization of the complete chloroplast genome of salix linearistipularis (franch.) hao 1936 |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8386700/ https://www.ncbi.nlm.nih.gov/pubmed/34447893 http://dx.doi.org/10.1080/23802359.2021.1967809 |
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