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The complete chloroplast genome sequence of Bambusa albolineata (bambusodae)
Bambusa albolineata (local name: Hua Zhu) is found in Zhejiang, Jiangxi, Fujian, Taiwan, and Guangdong provinces of China, and is often cultivated on low hills, flatlands, and along streams and rivers. Due to its long internodes and flexible material, it is used as timber wood in China. In the curre...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8386721/ https://www.ncbi.nlm.nih.gov/pubmed/34447891 http://dx.doi.org/10.1080/23802359.2021.1967798 |
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author | Deng, Zhiwen Chen, Qian Wu, Jun Ren, Ke Tarin, Muhammad Waqqas Khan He, Tianyou Chen, Lingyan Chen, Liguang Ul Haq, Ahsan Zheng, Yushan |
author_facet | Deng, Zhiwen Chen, Qian Wu, Jun Ren, Ke Tarin, Muhammad Waqqas Khan He, Tianyou Chen, Lingyan Chen, Liguang Ul Haq, Ahsan Zheng, Yushan |
author_sort | Deng, Zhiwen |
collection | PubMed |
description | Bambusa albolineata (local name: Hua Zhu) is found in Zhejiang, Jiangxi, Fujian, Taiwan, and Guangdong provinces of China, and is often cultivated on low hills, flatlands, and along streams and rivers. Due to its long internodes and flexible material, it is used as timber wood in China. In the current research, the complete chloroplast (CP) genome of B. albolineata was sequenced and reported for the first time. The complete CP genome sequence was 139,326 bp, including a large single-copy (LSC) region of 82,862 bp, a small single-copy (SSC) region of 12,870 bp, and a pair of invert repeats (IR) regions of 21,798 bp. Besides, the plastid genome consisted of 129 genes; having 82 protein-coding genes, 39 tRNA genes, and eight rRNA genes. The overall GC content of the genome was 44.2%. The phylogenetic analysis based on the complete chloroplast genome indicates that B. albolineata is strongly related to B. flexuosa and B. boniopsis. |
format | Online Article Text |
id | pubmed-8386721 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-83867212021-08-25 The complete chloroplast genome sequence of Bambusa albolineata (bambusodae) Deng, Zhiwen Chen, Qian Wu, Jun Ren, Ke Tarin, Muhammad Waqqas Khan He, Tianyou Chen, Lingyan Chen, Liguang Ul Haq, Ahsan Zheng, Yushan Mitochondrial DNA B Resour Mitogenome Announcement Bambusa albolineata (local name: Hua Zhu) is found in Zhejiang, Jiangxi, Fujian, Taiwan, and Guangdong provinces of China, and is often cultivated on low hills, flatlands, and along streams and rivers. Due to its long internodes and flexible material, it is used as timber wood in China. In the current research, the complete chloroplast (CP) genome of B. albolineata was sequenced and reported for the first time. The complete CP genome sequence was 139,326 bp, including a large single-copy (LSC) region of 82,862 bp, a small single-copy (SSC) region of 12,870 bp, and a pair of invert repeats (IR) regions of 21,798 bp. Besides, the plastid genome consisted of 129 genes; having 82 protein-coding genes, 39 tRNA genes, and eight rRNA genes. The overall GC content of the genome was 44.2%. The phylogenetic analysis based on the complete chloroplast genome indicates that B. albolineata is strongly related to B. flexuosa and B. boniopsis. Taylor & Francis 2021-08-24 /pmc/articles/PMC8386721/ /pubmed/34447891 http://dx.doi.org/10.1080/23802359.2021.1967798 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Deng, Zhiwen Chen, Qian Wu, Jun Ren, Ke Tarin, Muhammad Waqqas Khan He, Tianyou Chen, Lingyan Chen, Liguang Ul Haq, Ahsan Zheng, Yushan The complete chloroplast genome sequence of Bambusa albolineata (bambusodae) |
title | The complete chloroplast genome sequence of Bambusa albolineata (bambusodae) |
title_full | The complete chloroplast genome sequence of Bambusa albolineata (bambusodae) |
title_fullStr | The complete chloroplast genome sequence of Bambusa albolineata (bambusodae) |
title_full_unstemmed | The complete chloroplast genome sequence of Bambusa albolineata (bambusodae) |
title_short | The complete chloroplast genome sequence of Bambusa albolineata (bambusodae) |
title_sort | complete chloroplast genome sequence of bambusa albolineata (bambusodae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8386721/ https://www.ncbi.nlm.nih.gov/pubmed/34447891 http://dx.doi.org/10.1080/23802359.2021.1967798 |
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