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The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis

Cinnamomum septentrionale is a commercially important timber tree and wild spice plant classified in the Lauraceae. Here we sequenced the complete plastid genome of C. septentrionale to contribute to its phylogenetics and bioinformatics. The chloroplast genome of C. septentrionale is 152,729 bp in l...

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Autores principales: Lv, Qin, Liang, Bianjun, Guo, Xiaojuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8386741/
https://www.ncbi.nlm.nih.gov/pubmed/34447894
http://dx.doi.org/10.1080/23802359.2021.1967812
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author Lv, Qin
Liang, Bianjun
Guo, Xiaojuan
author_facet Lv, Qin
Liang, Bianjun
Guo, Xiaojuan
author_sort Lv, Qin
collection PubMed
description Cinnamomum septentrionale is a commercially important timber tree and wild spice plant classified in the Lauraceae. Here we sequenced the complete plastid genome of C. septentrionale to contribute to its phylogenetics and bioinformatics. The chloroplast genome of C. septentrionale is 152,729 bp in length and includes a large single copy (LSC) region of 93,639 bp, a small single copy (SSC) region of 18,858 bp, and two inverted repeat (IR) regions of 20,114 bp. The GC content of LSC, SSC, IR and the whole genome is 37.9%, 33.8%, 44.4%, and 39.1%, respectively. There are 128 genes, including 84 protein-coding, 36 tRNA, and eight rRNA genes. The phylogenetic analysis resolved C. septentrionale in a sister position to C. glanduliferum. The complete chloroplast genome sequence of C. septentrionale provides valuable genomic information for future systematic studies on Cinnamomum.
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spelling pubmed-83867412021-08-25 The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis Lv, Qin Liang, Bianjun Guo, Xiaojuan Mitochondrial DNA B Resour Mitogenome Announcement Cinnamomum septentrionale is a commercially important timber tree and wild spice plant classified in the Lauraceae. Here we sequenced the complete plastid genome of C. septentrionale to contribute to its phylogenetics and bioinformatics. The chloroplast genome of C. septentrionale is 152,729 bp in length and includes a large single copy (LSC) region of 93,639 bp, a small single copy (SSC) region of 18,858 bp, and two inverted repeat (IR) regions of 20,114 bp. The GC content of LSC, SSC, IR and the whole genome is 37.9%, 33.8%, 44.4%, and 39.1%, respectively. There are 128 genes, including 84 protein-coding, 36 tRNA, and eight rRNA genes. The phylogenetic analysis resolved C. septentrionale in a sister position to C. glanduliferum. The complete chloroplast genome sequence of C. septentrionale provides valuable genomic information for future systematic studies on Cinnamomum. Taylor & Francis 2021-08-24 /pmc/articles/PMC8386741/ /pubmed/34447894 http://dx.doi.org/10.1080/23802359.2021.1967812 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lv, Qin
Liang, Bianjun
Guo, Xiaojuan
The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis
title The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis
title_full The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis
title_fullStr The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis
title_full_unstemmed The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis
title_short The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis
title_sort complete chloroplast genome sequence of cinnamomum septentrionale (lauraceae) from sichuan province, china, a medicinal plant and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8386741/
https://www.ncbi.nlm.nih.gov/pubmed/34447894
http://dx.doi.org/10.1080/23802359.2021.1967812
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