Cargando…

Electrophilic Properties of 2′-Deoxyadenosine···Thymine Dimer: Photoelectron Spectroscopy and DFT Studies

[Image: see text] The anion radical of the 2′-deoxyadenosine···thymine (dAT(•–)) pair has been investigated experimentally and theoretically in the gas phase. By employing negative-ion photoelectron spectroscopy (PES), we have registered a spectrum typical for the valence-bound anion, featuring a br...

Descripción completa

Detalles Bibliográficos
Autores principales: Storoniak, Piotr, Rak, Janusz, Wang, Haopeng, Ko, Yeon Jae, Bowen, Kit H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8389985/
https://www.ncbi.nlm.nih.gov/pubmed/34310156
http://dx.doi.org/10.1021/acs.jpca.1c03803
_version_ 1783742992484401152
author Storoniak, Piotr
Rak, Janusz
Wang, Haopeng
Ko, Yeon Jae
Bowen, Kit H.
author_facet Storoniak, Piotr
Rak, Janusz
Wang, Haopeng
Ko, Yeon Jae
Bowen, Kit H.
author_sort Storoniak, Piotr
collection PubMed
description [Image: see text] The anion radical of the 2′-deoxyadenosine···thymine (dAT(•–)) pair has been investigated experimentally and theoretically in the gas phase. By employing negative-ion photoelectron spectroscopy (PES), we have registered a spectrum typical for the valence-bound anion, featuring a broad peak at the electron-binding energy (EBE) between ∼1.5 and 2.2 eV with the maximum at ∼1.9 eV. The measured value of the adiabatic electron affinity (AEA) for dAT was estimated to be ∼1.1 eV. Calculations performed at the M06-2X/6-31++G(d,p) level revealed that the structure, where thymine is coordinated to the sugar of dA by two hydrogen bonds, is responsible for the observed PES signal. The AEA(G) and the vertical detachment energy of 0.91 and 1.68 eV, respectively, calculated for this structure reproduce the experimental values well. The role of the possible proton transfer in the stabilization of anionic radical complexes is discussed.
format Online
Article
Text
id pubmed-8389985
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-83899852021-08-31 Electrophilic Properties of 2′-Deoxyadenosine···Thymine Dimer: Photoelectron Spectroscopy and DFT Studies Storoniak, Piotr Rak, Janusz Wang, Haopeng Ko, Yeon Jae Bowen, Kit H. J Phys Chem A [Image: see text] The anion radical of the 2′-deoxyadenosine···thymine (dAT(•–)) pair has been investigated experimentally and theoretically in the gas phase. By employing negative-ion photoelectron spectroscopy (PES), we have registered a spectrum typical for the valence-bound anion, featuring a broad peak at the electron-binding energy (EBE) between ∼1.5 and 2.2 eV with the maximum at ∼1.9 eV. The measured value of the adiabatic electron affinity (AEA) for dAT was estimated to be ∼1.1 eV. Calculations performed at the M06-2X/6-31++G(d,p) level revealed that the structure, where thymine is coordinated to the sugar of dA by two hydrogen bonds, is responsible for the observed PES signal. The AEA(G) and the vertical detachment energy of 0.91 and 1.68 eV, respectively, calculated for this structure reproduce the experimental values well. The role of the possible proton transfer in the stabilization of anionic radical complexes is discussed. American Chemical Society 2021-07-26 2021-08-05 /pmc/articles/PMC8389985/ /pubmed/34310156 http://dx.doi.org/10.1021/acs.jpca.1c03803 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Storoniak, Piotr
Rak, Janusz
Wang, Haopeng
Ko, Yeon Jae
Bowen, Kit H.
Electrophilic Properties of 2′-Deoxyadenosine···Thymine Dimer: Photoelectron Spectroscopy and DFT Studies
title Electrophilic Properties of 2′-Deoxyadenosine···Thymine Dimer: Photoelectron Spectroscopy and DFT Studies
title_full Electrophilic Properties of 2′-Deoxyadenosine···Thymine Dimer: Photoelectron Spectroscopy and DFT Studies
title_fullStr Electrophilic Properties of 2′-Deoxyadenosine···Thymine Dimer: Photoelectron Spectroscopy and DFT Studies
title_full_unstemmed Electrophilic Properties of 2′-Deoxyadenosine···Thymine Dimer: Photoelectron Spectroscopy and DFT Studies
title_short Electrophilic Properties of 2′-Deoxyadenosine···Thymine Dimer: Photoelectron Spectroscopy and DFT Studies
title_sort electrophilic properties of 2′-deoxyadenosine···thymine dimer: photoelectron spectroscopy and dft studies
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8389985/
https://www.ncbi.nlm.nih.gov/pubmed/34310156
http://dx.doi.org/10.1021/acs.jpca.1c03803
work_keys_str_mv AT storoniakpiotr electrophilicpropertiesof2deoxyadenosinethyminedimerphotoelectronspectroscopyanddftstudies
AT rakjanusz electrophilicpropertiesof2deoxyadenosinethyminedimerphotoelectronspectroscopyanddftstudies
AT wanghaopeng electrophilicpropertiesof2deoxyadenosinethyminedimerphotoelectronspectroscopyanddftstudies
AT koyeonjae electrophilicpropertiesof2deoxyadenosinethyminedimerphotoelectronspectroscopyanddftstudies
AT bowenkith electrophilicpropertiesof2deoxyadenosinethyminedimerphotoelectronspectroscopyanddftstudies