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Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig

Reverse transcription quantitative real-time polymerase chain reaction is one of the important methods to investigate gene expression in cells and tissues. However, if the data cannot be normalized with appropriate reference genes, the results may be unreliable. In this study, we detected the expres...

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Autores principales: Xie, Chun-Di, Wang, Bingyuan, Shen, Zhao-Ji, Yao, Wen-Ye, Ao, Hong, Li, Bugao, Pei, Yangli, Zhou, Rong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8390154/
https://www.ncbi.nlm.nih.gov/pubmed/34458368
http://dx.doi.org/10.1155/2021/5364190
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author Xie, Chun-Di
Wang, Bingyuan
Shen, Zhao-Ji
Yao, Wen-Ye
Ao, Hong
Li, Bugao
Pei, Yangli
Zhou, Rong
author_facet Xie, Chun-Di
Wang, Bingyuan
Shen, Zhao-Ji
Yao, Wen-Ye
Ao, Hong
Li, Bugao
Pei, Yangli
Zhou, Rong
author_sort Xie, Chun-Di
collection PubMed
description Reverse transcription quantitative real-time polymerase chain reaction is one of the important methods to investigate gene expression in cells and tissues. However, if the data cannot be normalized with appropriate reference genes, the results may be unreliable. In this study, we detected the expression of 15 reference genes in three pig cell lines. The results showed that SDHA and ALDOA were the most stable reference genes in 3D4/21 cells. TOP2B, TBP, and PPIA were the most stable reference genes in PK-15 cells. SDHA and ALDOA were the most stable reference genes in IPEC-J2 cells. In addition, each cell line only needs to use two reference genes to standardize the expression of target genes. Taken together, this study provides a reference for different pig cell lines to select reference genes and also provides a theoretical basis for the use of these cell lines in related functional researches.
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spelling pubmed-83901542021-08-27 Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig Xie, Chun-Di Wang, Bingyuan Shen, Zhao-Ji Yao, Wen-Ye Ao, Hong Li, Bugao Pei, Yangli Zhou, Rong Biomed Res Int Research Article Reverse transcription quantitative real-time polymerase chain reaction is one of the important methods to investigate gene expression in cells and tissues. However, if the data cannot be normalized with appropriate reference genes, the results may be unreliable. In this study, we detected the expression of 15 reference genes in three pig cell lines. The results showed that SDHA and ALDOA were the most stable reference genes in 3D4/21 cells. TOP2B, TBP, and PPIA were the most stable reference genes in PK-15 cells. SDHA and ALDOA were the most stable reference genes in IPEC-J2 cells. In addition, each cell line only needs to use two reference genes to standardize the expression of target genes. Taken together, this study provides a reference for different pig cell lines to select reference genes and also provides a theoretical basis for the use of these cell lines in related functional researches. Hindawi 2021-08-18 /pmc/articles/PMC8390154/ /pubmed/34458368 http://dx.doi.org/10.1155/2021/5364190 Text en Copyright © 2021 Chun-Di Xie et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Xie, Chun-Di
Wang, Bingyuan
Shen, Zhao-Ji
Yao, Wen-Ye
Ao, Hong
Li, Bugao
Pei, Yangli
Zhou, Rong
Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig
title Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig
title_full Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig
title_fullStr Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig
title_full_unstemmed Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig
title_short Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig
title_sort validation of the reference genes for the gene expression studies in different cell lines of pig
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8390154/
https://www.ncbi.nlm.nih.gov/pubmed/34458368
http://dx.doi.org/10.1155/2021/5364190
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