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Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning

Time series analysis comprises a wide repertoire of methods for extracting information from data sets. Despite great advances in time series analysis, identifying and quantifying the strength of nonlinear temporal correlations remain a challenge. We have recently proposed a new method based on train...

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Autores principales: Boaretto, Bruno R. R., Budzinski, Roberto C., Rossi, Kalel L., Prado, Thiago L., Lopes, Sergio R., Masoller, Cristina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8391825/
https://www.ncbi.nlm.nih.gov/pubmed/34441165
http://dx.doi.org/10.3390/e23081025
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author Boaretto, Bruno R. R.
Budzinski, Roberto C.
Rossi, Kalel L.
Prado, Thiago L.
Lopes, Sergio R.
Masoller, Cristina
author_facet Boaretto, Bruno R. R.
Budzinski, Roberto C.
Rossi, Kalel L.
Prado, Thiago L.
Lopes, Sergio R.
Masoller, Cristina
author_sort Boaretto, Bruno R. R.
collection PubMed
description Time series analysis comprises a wide repertoire of methods for extracting information from data sets. Despite great advances in time series analysis, identifying and quantifying the strength of nonlinear temporal correlations remain a challenge. We have recently proposed a new method based on training a machine learning algorithm to predict the temporal correlation parameter, [Formula: see text] , of flicker noise (FN) time series. The algorithm is trained using as input features the probabilities of ordinal patterns computed from FN time series, [Formula: see text] , generated with different values of [Formula: see text]. Then, the ordinal probabilities computed from the time series of interest, [Formula: see text] , are used as input features to the trained algorithm and that returns a value, [Formula: see text] , that contains meaningful information about the temporal correlations present in [Formula: see text]. We have also shown that the difference, [Formula: see text] , of the permutation entropy (PE) of the time series of interest, [Formula: see text] , and the PE of a FN time series generated with [Formula: see text] , [Formula: see text] , allows the identification of the underlying determinism in [Formula: see text]. Here, we apply our methodology to different datasets and analyze how [Formula: see text] and [Formula: see text] correlate with well-known quantifiers of chaos and complexity. We also discuss the limitations for identifying determinism in highly chaotic time series and in periodic time series contaminated by noise. The open source algorithm is available on Github.
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spelling pubmed-83918252021-08-28 Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning Boaretto, Bruno R. R. Budzinski, Roberto C. Rossi, Kalel L. Prado, Thiago L. Lopes, Sergio R. Masoller, Cristina Entropy (Basel) Article Time series analysis comprises a wide repertoire of methods for extracting information from data sets. Despite great advances in time series analysis, identifying and quantifying the strength of nonlinear temporal correlations remain a challenge. We have recently proposed a new method based on training a machine learning algorithm to predict the temporal correlation parameter, [Formula: see text] , of flicker noise (FN) time series. The algorithm is trained using as input features the probabilities of ordinal patterns computed from FN time series, [Formula: see text] , generated with different values of [Formula: see text]. Then, the ordinal probabilities computed from the time series of interest, [Formula: see text] , are used as input features to the trained algorithm and that returns a value, [Formula: see text] , that contains meaningful information about the temporal correlations present in [Formula: see text]. We have also shown that the difference, [Formula: see text] , of the permutation entropy (PE) of the time series of interest, [Formula: see text] , and the PE of a FN time series generated with [Formula: see text] , [Formula: see text] , allows the identification of the underlying determinism in [Formula: see text]. Here, we apply our methodology to different datasets and analyze how [Formula: see text] and [Formula: see text] correlate with well-known quantifiers of chaos and complexity. We also discuss the limitations for identifying determinism in highly chaotic time series and in periodic time series contaminated by noise. The open source algorithm is available on Github. MDPI 2021-08-09 /pmc/articles/PMC8391825/ /pubmed/34441165 http://dx.doi.org/10.3390/e23081025 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Boaretto, Bruno R. R.
Budzinski, Roberto C.
Rossi, Kalel L.
Prado, Thiago L.
Lopes, Sergio R.
Masoller, Cristina
Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning
title Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning
title_full Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning
title_fullStr Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning
title_full_unstemmed Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning
title_short Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning
title_sort evaluating temporal correlations in time series using permutation entropy, ordinal probabilities and machine learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8391825/
https://www.ncbi.nlm.nih.gov/pubmed/34441165
http://dx.doi.org/10.3390/e23081025
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