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Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples
Forecasting COVID-19 disease severity is key to supporting clinical decision making and assisting resource allocation, particularly in intensive care units (ICUs). Here, we investigated the utility of time- and frequency-related features of the backscattered signal of serum patient samples to predic...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8392709/ https://www.ncbi.nlm.nih.gov/pubmed/34441244 http://dx.doi.org/10.3390/diagnostics11081309 |
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author | Faria, Simão P. Carpinteiro, Cristiana Pinto, Vanessa Rodrigues, Sandra M. Alves, José Marques, Filipe Lourenço, Marta Santos, Paulo H. Ramos, Angélica Cardoso, Maria J. Guimarães, João T. Rocha, Sara Sampaio, Paula Clifton, David A. Mumtaz, Mehak Paiva, Joana S. |
author_facet | Faria, Simão P. Carpinteiro, Cristiana Pinto, Vanessa Rodrigues, Sandra M. Alves, José Marques, Filipe Lourenço, Marta Santos, Paulo H. Ramos, Angélica Cardoso, Maria J. Guimarães, João T. Rocha, Sara Sampaio, Paula Clifton, David A. Mumtaz, Mehak Paiva, Joana S. |
author_sort | Faria, Simão P. |
collection | PubMed |
description | Forecasting COVID-19 disease severity is key to supporting clinical decision making and assisting resource allocation, particularly in intensive care units (ICUs). Here, we investigated the utility of time- and frequency-related features of the backscattered signal of serum patient samples to predict COVID-19 disease severity immediately after diagnosis. ICU admission was the primary outcome used to define disease severity. We developed a stacking ensemble machine learning model including the backscattered signal features (optical fingerprint), patient comorbidities, and age (AUROC = 0.80), which significantly outperformed the predictive value of clinical and laboratory variables available at hospital admission (AUROC = 0.71). The information derived from patient optical fingerprints was not strongly correlated with any clinical/laboratory variable, suggesting that optical fingerprinting brings unique information for COVID-19 severity risk assessment. Optical fingerprinting is a label-free, real-time, and low-cost technology that can be easily integrated as a front-line tool to facilitate the triage and clinical management of COVID-19 patients. |
format | Online Article Text |
id | pubmed-8392709 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-83927092021-08-28 Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples Faria, Simão P. Carpinteiro, Cristiana Pinto, Vanessa Rodrigues, Sandra M. Alves, José Marques, Filipe Lourenço, Marta Santos, Paulo H. Ramos, Angélica Cardoso, Maria J. Guimarães, João T. Rocha, Sara Sampaio, Paula Clifton, David A. Mumtaz, Mehak Paiva, Joana S. Diagnostics (Basel) Article Forecasting COVID-19 disease severity is key to supporting clinical decision making and assisting resource allocation, particularly in intensive care units (ICUs). Here, we investigated the utility of time- and frequency-related features of the backscattered signal of serum patient samples to predict COVID-19 disease severity immediately after diagnosis. ICU admission was the primary outcome used to define disease severity. We developed a stacking ensemble machine learning model including the backscattered signal features (optical fingerprint), patient comorbidities, and age (AUROC = 0.80), which significantly outperformed the predictive value of clinical and laboratory variables available at hospital admission (AUROC = 0.71). The information derived from patient optical fingerprints was not strongly correlated with any clinical/laboratory variable, suggesting that optical fingerprinting brings unique information for COVID-19 severity risk assessment. Optical fingerprinting is a label-free, real-time, and low-cost technology that can be easily integrated as a front-line tool to facilitate the triage and clinical management of COVID-19 patients. MDPI 2021-07-21 /pmc/articles/PMC8392709/ /pubmed/34441244 http://dx.doi.org/10.3390/diagnostics11081309 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Faria, Simão P. Carpinteiro, Cristiana Pinto, Vanessa Rodrigues, Sandra M. Alves, José Marques, Filipe Lourenço, Marta Santos, Paulo H. Ramos, Angélica Cardoso, Maria J. Guimarães, João T. Rocha, Sara Sampaio, Paula Clifton, David A. Mumtaz, Mehak Paiva, Joana S. Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples |
title | Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples |
title_full | Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples |
title_fullStr | Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples |
title_full_unstemmed | Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples |
title_short | Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples |
title_sort | forecasting covid-19 severity by intelligent optical fingerprinting of blood samples |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8392709/ https://www.ncbi.nlm.nih.gov/pubmed/34441244 http://dx.doi.org/10.3390/diagnostics11081309 |
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