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A Clinical Decision Web to Predict ICU Admission or Death for Patients Hospitalised with COVID-19 Using Machine Learning Algorithms

The purpose of the study was to build a predictive model for estimating the risk of ICU admission or mortality among patients hospitalized with COVID-19 and provide a user-friendly tool to assist clinicians in the decision-making process. The study cohort comprised 3623 patients with confirmed COVID...

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Autores principales: Aznar-Gimeno, Rocío, Esteban, Luis M., Labata-Lezaun, Gorka, del-Hoyo-Alonso, Rafael, Abadia-Gallego, David, Paño-Pardo, J. Ramón, Esquillor-Rodrigo, M. José, Lanas, Ángel, Serrano, M. Trinidad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8394359/
https://www.ncbi.nlm.nih.gov/pubmed/34444425
http://dx.doi.org/10.3390/ijerph18168677
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author Aznar-Gimeno, Rocío
Esteban, Luis M.
Labata-Lezaun, Gorka
del-Hoyo-Alonso, Rafael
Abadia-Gallego, David
Paño-Pardo, J. Ramón
Esquillor-Rodrigo, M. José
Lanas, Ángel
Serrano, M. Trinidad
author_facet Aznar-Gimeno, Rocío
Esteban, Luis M.
Labata-Lezaun, Gorka
del-Hoyo-Alonso, Rafael
Abadia-Gallego, David
Paño-Pardo, J. Ramón
Esquillor-Rodrigo, M. José
Lanas, Ángel
Serrano, M. Trinidad
author_sort Aznar-Gimeno, Rocío
collection PubMed
description The purpose of the study was to build a predictive model for estimating the risk of ICU admission or mortality among patients hospitalized with COVID-19 and provide a user-friendly tool to assist clinicians in the decision-making process. The study cohort comprised 3623 patients with confirmed COVID-19 who were hospitalized in the SALUD hospital network of Aragon (Spain), which includes 23 hospitals, between February 2020 and January 2021, a period that includes several pandemic waves. Up to 165 variables were analysed, including demographics, comorbidity, chronic drugs, vital signs, and laboratory data. To build the predictive models, different techniques and machine learning (ML) algorithms were explored: multilayer perceptron, random forest, and extreme gradient boosting (XGBoost). A reduction dimensionality procedure was used to minimize the features to 20, ensuring feasible use of the tool in practice. Our model was validated both internally and externally. We also assessed its calibration and provide an analysis of the optimal cut-off points depending on the metric to be optimized. The best performing algorithm was XGBoost. The final model achieved good discrimination for the external validation set (AUC = 0.821, 95% CI 0.787–0.854) and accurate calibration (slope = 1, intercept = −0.12). A cut-off of 0.4 provides a sensitivity and specificity of 0.71 and 0.78, respectively. In conclusion, we built a risk prediction model from a large amount of data from several pandemic waves, which had good calibration and discrimination ability. We also created a user-friendly web application that can aid rapid decision-making in clinical practice.
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spelling pubmed-83943592021-08-28 A Clinical Decision Web to Predict ICU Admission or Death for Patients Hospitalised with COVID-19 Using Machine Learning Algorithms Aznar-Gimeno, Rocío Esteban, Luis M. Labata-Lezaun, Gorka del-Hoyo-Alonso, Rafael Abadia-Gallego, David Paño-Pardo, J. Ramón Esquillor-Rodrigo, M. José Lanas, Ángel Serrano, M. Trinidad Int J Environ Res Public Health Perspective The purpose of the study was to build a predictive model for estimating the risk of ICU admission or mortality among patients hospitalized with COVID-19 and provide a user-friendly tool to assist clinicians in the decision-making process. The study cohort comprised 3623 patients with confirmed COVID-19 who were hospitalized in the SALUD hospital network of Aragon (Spain), which includes 23 hospitals, between February 2020 and January 2021, a period that includes several pandemic waves. Up to 165 variables were analysed, including demographics, comorbidity, chronic drugs, vital signs, and laboratory data. To build the predictive models, different techniques and machine learning (ML) algorithms were explored: multilayer perceptron, random forest, and extreme gradient boosting (XGBoost). A reduction dimensionality procedure was used to minimize the features to 20, ensuring feasible use of the tool in practice. Our model was validated both internally and externally. We also assessed its calibration and provide an analysis of the optimal cut-off points depending on the metric to be optimized. The best performing algorithm was XGBoost. The final model achieved good discrimination for the external validation set (AUC = 0.821, 95% CI 0.787–0.854) and accurate calibration (slope = 1, intercept = −0.12). A cut-off of 0.4 provides a sensitivity and specificity of 0.71 and 0.78, respectively. In conclusion, we built a risk prediction model from a large amount of data from several pandemic waves, which had good calibration and discrimination ability. We also created a user-friendly web application that can aid rapid decision-making in clinical practice. MDPI 2021-08-17 /pmc/articles/PMC8394359/ /pubmed/34444425 http://dx.doi.org/10.3390/ijerph18168677 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Perspective
Aznar-Gimeno, Rocío
Esteban, Luis M.
Labata-Lezaun, Gorka
del-Hoyo-Alonso, Rafael
Abadia-Gallego, David
Paño-Pardo, J. Ramón
Esquillor-Rodrigo, M. José
Lanas, Ángel
Serrano, M. Trinidad
A Clinical Decision Web to Predict ICU Admission or Death for Patients Hospitalised with COVID-19 Using Machine Learning Algorithms
title A Clinical Decision Web to Predict ICU Admission or Death for Patients Hospitalised with COVID-19 Using Machine Learning Algorithms
title_full A Clinical Decision Web to Predict ICU Admission or Death for Patients Hospitalised with COVID-19 Using Machine Learning Algorithms
title_fullStr A Clinical Decision Web to Predict ICU Admission or Death for Patients Hospitalised with COVID-19 Using Machine Learning Algorithms
title_full_unstemmed A Clinical Decision Web to Predict ICU Admission or Death for Patients Hospitalised with COVID-19 Using Machine Learning Algorithms
title_short A Clinical Decision Web to Predict ICU Admission or Death for Patients Hospitalised with COVID-19 Using Machine Learning Algorithms
title_sort clinical decision web to predict icu admission or death for patients hospitalised with covid-19 using machine learning algorithms
topic Perspective
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8394359/
https://www.ncbi.nlm.nih.gov/pubmed/34444425
http://dx.doi.org/10.3390/ijerph18168677
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